Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:95549787-95700383

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctss 3 95526786 to 95556403 29617 + protein coding gene cathepsin S
Tssr30592 3 95550048 to 95550060 12 + TSS region transcription start site region 30592
Tssr30593 3 95550074 to 95550086 12 + TSS region transcription start site region 30593
Tssr970 3 95550091 to 95550097 6 + TSS region transcription start site region 970
Tssr30594 3 95550101 to 95550119 18 + TSS region transcription start site region 30594
Tssr34498 3 95550118 to 95550158 40 - TSS region transcription start site region 34498
Tssr30595 3 95550125 to 95550129 4 + TSS region transcription start site region 30595
Tssr30596 3 95554472 to 95554482 10 + TSS region transcription start site region 30596
Tssr30597 3 95556082 to 95556114 32 + TSS region transcription start site region 30597
Tssr30598 3 95556115 to 95556188 73 + TSS region transcription start site region 30598
Tssr34499 3 95556170 to 95556193 23 - TSS region transcription start site region 34499
Tssr30599 3 95556194 to 95556247 53 + TSS region transcription start site region 30599
Tssr30600 3 95556302 to 95556325 23 + TSS region transcription start site region 30600
Tssr30601 3 95556339 to 95556346 7 + TSS region transcription start site region 30601
Tssr34500 3 95556394 to 95556403 9 - TSS region transcription start site region 34500
Cpgi13514 3 95559426 to 95559946 520 CpG island CpG island 13514
Tssr30602 3 95559671 to 95559691 20 + TSS region transcription start site region 30602
Hormad1 3 95559677 to 95587671 27994 + protein coding gene HORMA domain containing 1
Gm40097 3 95585881 to 95588830 2949 - lncRNA gene predicted gene, 40097
Tssr30603 3 95588928 to 95588953 25 + TSS region transcription start site region 30603
Golph3l 3 95588934 to 95619247 30313 + protein coding gene golgi phosphoprotein 3-like
Tssr30604 3 95588960 to 95588988 28 + TSS region transcription start site region 30604
Gm42671 3 95588971 to 95590574 1603 + unclassified gene predicted gene 42671
Tssr30605 3 95588991 to 95589009 18 + TSS region transcription start site region 30605
Tssr30606 3 95589035 to 95589044 9 + TSS region transcription start site region 30606
Cpgi13515 3 95622226 to 95622529 303 CpG island CpG island 13515
Tssr30607 3 95622236 to 95622247 11 + TSS region transcription start site region 30607
Rps10-ps1 3 95622278 to 95622772 494 + pseudogene ribosomal protein S10, pseudogene 1
Tssr30608 3 95622636 to 95622668 32 + TSS region transcription start site region 30608
Tssr30609 3 95623892 to 95623900 8 + TSS region transcription start site region 30609
Tssr34501 3 95624722 to 95624749 27 - TSS region transcription start site region 34501
Cpgi13516 3 95624787 to 95625383 596 CpG island CpG island 13516
Tssr30610 3 95624971 to 95625021 50 + TSS region transcription start site region 30610
Ensa 3 95624993 to 95632102 7109 + protein coding gene endosulfine alpha
Tssr30611 3 95625484 to 95625497 13 + TSS region transcription start site region 30611
Tssr30612 3 95628631 to 95628651 20 + TSS region transcription start site region 30612
E330034L11Rik 3 95639304 to 95641045 1741 + unclassified gene RIKEN cDNA E330034L11 gene
Tssr30613 3 95645592 to 95645603 11 + TSS region transcription start site region 30613
Tssr30614 3 95645654 to 95645663 9 + TSS region transcription start site region 30614
Tssr34502 3 95650506 to 95650526 20 - TSS region transcription start site region 34502
Tssr30615 3 95650864 to 95650887 23 + TSS region transcription start site region 30615
Tssr30616 3 95650889 to 95650906 17 + TSS region transcription start site region 30616
Tssr30617 3 95650918 to 95650937 19 + TSS region transcription start site region 30617
Tssr34503 3 95651337 to 95651341 4 - TSS region transcription start site region 34503
Tssr30618 3 95651473 to 95651511 38 + TSS region transcription start site region 30618
Tssr30619 3 95651760 to 95651799 39 + TSS region transcription start site region 30619
Tssr34504 3 95652010 to 95652014 4 - TSS region transcription start site region 34504
Tssr34505 3 95652394 to 95652409 15 - TSS region transcription start site region 34505
Tssr34506 3 95653718 to 95653725 7 - TSS region transcription start site region 34506
Tssr30620 3 95653750 to 95653763 13 + TSS region transcription start site region 30620
Tssr971 3 95653775 to 95653797 22 - TSS region transcription start site region 971
Tssr30621 3 95653896 to 95653907 11 + TSS region transcription start site region 30621
Tssr30622 3 95653917 to 95653924 7 + TSS region transcription start site region 30622
Tssr30623 3 95653930 to 95653933 3 + TSS region transcription start site region 30623
Tssr30624 3 95656173 to 95656178 5 + TSS region transcription start site region 30624
Cpgi13517 3 95658347 to 95659758 1411 CpG island CpG island 13517
Tssr34507 3 95658544 to 95658554 10 - TSS region transcription start site region 34507
Tssr34508 3 95658561 to 95658588 27 - TSS region transcription start site region 34508
Tssr34509 3 95658606 to 95658625 19 - TSS region transcription start site region 34509
Tssr34510 3 95658630 to 95658660 30 - TSS region transcription start site region 34510
Tssr30625 3 95658714 to 95658723 9 + TSS region transcription start site region 30625
Tssr30626 3 95658738 to 95658749 11 + TSS region transcription start site region 30626
Tssr30627 3 95658771 to 95658787 16 + TSS region transcription start site region 30627
Mcl1 3 95658788 to 95663176 4388 + protein coding gene myeloid cell leukemia sequence 1
Tssr30628 3 95659050 to 95659082 32 + TSS region transcription start site region 30628
Tssr30629 3 95659098 to 95659129 31 + TSS region transcription start site region 30629
Tssr30630 3 95659260 to 95659280 20 + TSS region transcription start site region 30630
Tssr30631 3 95659302 to 95659320 18 + TSS region transcription start site region 30631
Tssr34511 3 95659388 to 95659400 12 - TSS region transcription start site region 34511
Tssr34512 3 95659559 to 95659579 20 - TSS region transcription start site region 34512
Tssr30632 3 95659622 to 95659713 91 + TSS region transcription start site region 30632
Tssr30633 3 95660999 to 95661052 53 + TSS region transcription start site region 30633
Tssr30634 3 95661677 to 95661751 74 + TSS region transcription start site region 30634
Tssr30635 3 95661759 to 95661816 57 + TSS region transcription start site region 30635
Tssr30636 3 95661859 to 95661905 46 + TSS region transcription start site region 30636
Tssr30637 3 95662032 to 95662055 23 + TSS region transcription start site region 30637
Tssr30638 3 95662077 to 95662150 73 + TSS region transcription start site region 30638
Tssr30639 3 95662182 to 95662197 15 + TSS region transcription start site region 30639
Tssr34513 3 95673782 to 95673793 11 - TSS region transcription start site region 34513
Tssr34514 3 95673813 to 95673825 12 - TSS region transcription start site region 34514
Tssr30640 3 95673975 to 95674007 32 + TSS region transcription start site region 30640
Tssr34515 3 95674134 to 95674153 19 - TSS region transcription start site region 34515
Tssr30641 3 95674465 to 95674482 17 + TSS region transcription start site region 30641
Tssr30642 3 95674486 to 95674502 16 + TSS region transcription start site region 30642
Adamtsl4 3 95676201 to 95687917 11716 - protein coding gene ADAMTS-like 4
Tssr34516 3 95681457 to 95681498 41 - TSS region transcription start site region 34516
Tssr34517 3 95684525 to 95684556 31 - TSS region transcription start site region 34517
Tssr34518 3 95685589 to 95685607 18 - TSS region transcription start site region 34518
Cpgi13518 3 95687511 to 95688256 745 CpG island CpG island 13518
Tssr34519 3 95687846 to 95687895 49 - TSS region transcription start site region 34519