MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:95286096-95317176

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mindy1	3	95282503 to 95296166	13663	+	protein coding gene	MINDY lysine 48 deubiquitinase 1
Tssr30535	3	95286738 to 95286782	44	+	TSS region	transcription start site region 30535
Tssr30536	3	95287640 to 95287654	14	+	TSS region	transcription start site region 30536
Tssr34466	3	95293676 to 95293721	45	-	TSS region	transcription start site region 34466
Anxa9	3	95296096 to 95307176	11080	-	protein coding gene	annexin A9
Tssr34467	3	95306794 to 95306810	16	-	TSS region	transcription start site region 34467
6330562C20Rik	3	95307076 to 95315127	8051	-	antisense lncRNA gene	RIKEN cDNA 6330562C20 gene
Tssr34468	3	95307132 to 95307181	49	-	TSS region	transcription start site region 34468
Tssr34469	3	95307186 to 95307202	16	-	TSS region	transcription start site region 34469
Tssr34470	3	95307449 to 95307459	10	-	TSS region	transcription start site region 34470
Cpgi13508	3	95314766 to 95315836	1070		CpG island	CpG island 13508
Cers2	3	95314805 to 95323599	8794	+	protein coding gene	ceramide synthase 2
Tssr30537	3	95314832 to 95314866	34	+	TSS region	transcription start site region 30537
Tssr34471	3	95315086 to 95315103	17	-	TSS region	transcription start site region 34471
Tssr34472	3	95315152 to 95315217	65	-	TSS region	transcription start site region 34472
Tssr30538	3	95315240 to 95315273	33	+	TSS region	transcription start site region 30538
Tssr30539	3	95315282 to 95315302	20	+	TSS region	transcription start site region 30539
Tssr34473	3	95315733 to 95315759	26	-	TSS region	transcription start site region 34473