Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:95129203-95219483

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmod4 3 95124476 to 95129209 4733 + protein coding gene tropomodulin 4
Scnm1 3 95129719 to 95134045 4326 - protein coding gene sodium channel modifier 1
Tssr30498 3 95131435 to 95131440 5 + TSS region transcription start site region 30498
D3Umi10 3 95133727 to 95134239 512 DNA segment DNA segment, Chr 3, University of Michigan 10
Cpgi13498 3 95133807 to 95134055 248 CpG island CpG island 13498
Tssr34419 3 95133898 to 95133913 15 - TSS region transcription start site region 34419
Tssr34420 3 95133936 to 95133988 52 - TSS region transcription start site region 34420
Tssr34421 3 95133989 to 95134017 28 - TSS region transcription start site region 34421
Lysmd1 3 95134088 to 95139518 5430 + protein coding gene LysM, putative peptidoglycan-binding, domain containing 1
Tssr968 3 95137923 to 95137946 23 + TSS region transcription start site region 968
Mir8099-1 3 95139060 to 95139186 126 - miRNA gene microRNA 8099-1
Tnfaip8l2 3 95139521 to 95142360 2839 - protein coding gene tumor necrosis factor, alpha-induced protein 8-like 2
Tssr34422 3 95139842 to 95139865 23 - TSS region transcription start site region 34422
Cpgi13499 3 95140051 to 95140637 586 CpG island CpG island 13499
Tssr34423 3 95140083 to 95140121 38 - TSS region transcription start site region 34423
Tssr34424 3 95142346 to 95142362 16 - TSS region transcription start site region 34424
Tssr34425 3 95142363 to 95142374 11 - TSS region transcription start site region 34425
Gm9169 3 95144371 to 95144906 535 + pseudogene predicted gene 9169
Cpgi13500 3 95160057 to 95161602 1545 CpG island CpG island 13500
Tssr30499 3 95160449 to 95160505 56 + TSS region transcription start site region 30499
Sema6c 3 95160457 to 95174024 13567 + protein coding gene sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
Tssr30500 3 95160969 to 95160973 4 + TSS region transcription start site region 30500
Tssr30501 3 95164265 to 95164281 16 + TSS region transcription start site region 30501
Tssr30502 3 95164309 to 95164333 24 + TSS region transcription start site region 30502
Cpgi13501 3 95172037 to 95173926 1889 CpG island CpG island 13501
Cpgi13502 3 95174203 to 95174483 280 CpG island CpG island 13502
Gabpb2 3 95181766 to 95217916 36150 - protein coding gene GA repeat binding protein, beta 2
Tssr34426 3 95190762 to 95190767 5 - TSS region transcription start site region 34426
Tssr34427 3 95193736 to 95193738 2 - TSS region transcription start site region 34427
Tssr30503 3 95217417 to 95217484 67 + TSS region transcription start site region 30503
Gm16740 3 95217457 to 95226658 9201 + antisense lncRNA gene predicted gene, 16740
Cpgi13503 3 95217484 to 95218188 704 CpG island CpG island 13503
Tssr34428 3 95217690 to 95217728 38 - TSS region transcription start site region 34428
Tssr34429 3 95217741 to 95217765 24 - TSS region transcription start site region 34429
Tssr34430 3 95217877 to 95217918 41 - TSS region transcription start site region 34430
Tssr34431 3 95217931 to 95217989 58 - TSS region transcription start site region 34431
Tssr30504 3 95218000 to 95218059 59 + TSS region transcription start site region 30504
Tssr30505 3 95218070 to 95218082 12 + TSS region transcription start site region 30505
Mllt11 3 95219135 to 95232171 13036 - protein coding gene myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11