Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Gm36237 | 3 | 5038 | + | lncRNA gene | predicted gene, 36237 | |
Gm26279 | 3 | 101 | - | snRNA gene | predicted gene, 26279 | |
Tssr30476 | 3 | 32 | + | TSS region | transcription start site region 30476 | |
Selenbp1 | 3 | 11675 | + | protein coding gene | selenium binding protein 1 | |
Tssr30477 | 3 | 7 | + | TSS region | transcription start site region 30477 | |
D3Umi6 | 3 | 237 | DNA segment | DNA segment, Chr 3, University of Michigan 6 | ||
4930532J02Rik | 3 | 679 | unclassified gene | RIKEN cDNA 4930532J02 gene | ||
Cpgi13492 | 3 | 576 | CpG island | CpG island 13492 | ||
Rfx5 | 3 | 7486 | + | protein coding gene | regulatory factor X, 5 (influences HLA class II expression) | |
Tssr30478 | 3 | 101 | + | TSS region | transcription start site region 30478 | |
B230398E01Rik | 3 | 3014 | - | antisense lncRNA gene | RIKEN cDNA B230398E01 gene | |
Cpgi13493 | 3 | 806 | CpG island | CpG island 13493 | ||
Tssr30479 | 3 | 26 | + | TSS region | transcription start site region 30479 | |
Tssr30480 | 3 | 25 | + | TSS region | transcription start site region 30480 | |
Pi4kb | 3 | 32112 | + | protein coding gene | phosphatidylinositol 4-kinase beta | |
Tssr30481 | 3 | 11 | + | TSS region | transcription start site region 30481 | |
Tssr30482 | 3 | 53 | + | TSS region | transcription start site region 30482 | |
Tssr30483 | 3 | 22 | + | TSS region | transcription start site region 30483 | |
Tssr34410 | 3 | 6 | - | TSS region | transcription start site region 34410 | |
D3Umi7 | 3 | 815 | DNA segment | DNA segment, Chr 3, University of Michigan 7 | ||
Tssr966 | 3 | 14 | + | TSS region | transcription start site region 966 | |
A730011C13Rik | 3 | 2940 | - | antisense lncRNA gene | RIKEN cDNA A730011C13 gene | |
Tssr34411 | 3 | 23 | - | TSS region | transcription start site region 34411 | |
Gm15265 | 3 | 6069 | - | antisense lncRNA gene | predicted gene 15265 | |
Tssr34412 | 3 | 4 | - | TSS region | transcription start site region 34412 | |
Mir7013 | 3 | 71 | + | miRNA gene | microRNA 7013 | |
Tssr30484 | 3 | 46 | + | TSS region | transcription start site region 30484 | |
Tssr30485 | 3 | 13 | + | TSS region | transcription start site region 30485 | |
Zfp687 | 3 | 8858 | - | protein coding gene | zinc finger protein 687 | |
Cpgi13494 | 3 | 2368 | CpG island | CpG island 13494 | ||
Tssr34413 | 3 | 32 | - | TSS region | transcription start site region 34413 | |
Tssr34414 | 3 | 46 | - | TSS region | transcription start site region 34414 | |
4930481B07Rik | 3 | 4513 | + | lncRNA gene | RIKEN cDNA 4930481B07 gene | |
Tssr30486 | 3 | 30 | + | TSS region | transcription start site region 30486 | |
Tssr30487 | 3 | 25 | + | TSS region | transcription start site region 30487 | |
Tssr34415 | 3 | 21 | - | TSS region | transcription start site region 34415 | |
D3Mit76 | 3 | 128 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 76 | ||
Psmd4 | 3 | 9920 | - | protein coding gene | proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 | |
Tssr30488 | 3 | 7 | + | TSS region | transcription start site region 30488 | |
Cpgi13495 | 3 | 448 | CpG island | CpG island 13495 | ||
1700123N01Rik | 3 | 604 | unclassified gene | RIKEN cDNA 1700123N01 gene | ||
Tssr34416 | 3 | 37 | - | TSS region | transcription start site region 34416 | |
Pip5k1a | 3 | 48400 | - | protein coding gene | phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha | |
Gm24920 | 3 | 84 | - | snoRNA gene | predicted gene, 24920 | |
Gm40095 | 3 | 328 | - | pseudogene | predicted gene, 40095 | |
Gm22301 | 3 | 106 | + | snRNA gene | predicted gene, 22301 | |
D3Umi8 | 3 | 122 | DNA segment | DNA segment, Chr 3, University of Michigan 8 | ||
Cpgi13496 | 3 | 859 | CpG island | CpG island 13496 | ||
Tssr34417 | 3 | 79 | - | TSS region | transcription start site region 34417 | |
Tssr34418 | 3 | 15 | - | TSS region | transcription start site region 34418 | |
Cpgi13497 | 3 | 749 | CpG island | CpG island 13497 | ||
Tssr30489 | 3 | 74 | + | TSS region | transcription start site region 30489 | |
Vps72 | 3 | 12009 | + | protein coding gene | vacuolar protein sorting 72 | |
D3Umi9 | 3 | 353 | DNA segment | DNA segment, Chr 3, University of Michigan 9 | ||
Tssr30490 | 3 | 12 | + | TSS region | transcription start site region 30490 | |
Tssr967 | 3 | 12 | + | TSS region | transcription start site region 967 | |
Tssr30491 | 3 | 14 | + | TSS region | transcription start site region 30491 | |
Tmod4 | 3 | 4733 | + | protein coding gene | tropomodulin 4 | |
Tssr30492 | 3 | 78 | + | TSS region | transcription start site region 30492 | |
Tssr30493 | 3 | 10 | + | TSS region | transcription start site region 30493 | |
Tssr30494 | 3 | 7 | + | TSS region | transcription start site region 30494 | |
Tssr30495 | 3 | 9 | + | TSS region | transcription start site region 30495 | |
Tssr30496 | 3 | 9 | + | TSS region | transcription start site region 30496 | |
Tssr30497 | 3 | 35 | + | TSS region | transcription start site region 30497 | |
Scnm1 | 3 | 4326 | - | protein coding gene | sodium channel modifier 1 | |
Tssr30498 | 3 | 5 | + | TSS region | transcription start site region 30498 | |
D3Umi10 | 3 | 512 | DNA segment | DNA segment, Chr 3, University of Michigan 10 | ||
Cpgi13498 | 3 | 248 | CpG island | CpG island 13498 | ||
Tssr34419 | 3 | 15 | - | TSS region | transcription start site region 34419 | |
Tssr34420 | 3 | 52 | - | TSS region | transcription start site region 34420 | |
Tssr34421 | 3 | 28 | - | TSS region | transcription start site region 34421 | |
Lysmd1 | 3 | 5430 | + | protein coding gene | LysM, putative peptidoglycan-binding, domain containing 1 | |
Tssr968 | 3 | 23 | + | TSS region | transcription start site region 968 | |
Mir8099-1 | 3 | 126 | - | miRNA gene | microRNA 8099-1 | |
Tnfaip8l2 | 3 | 2839 | - | protein coding gene | tumor necrosis factor, alpha-induced protein 8-like 2 | |
Tssr34422 | 3 | 23 | - | TSS region | transcription start site region 34422 | |
Cpgi13499 | 3 | 586 | CpG island | CpG island 13499 | ||
Tssr34423 | 3 | 38 | - | TSS region | transcription start site region 34423 | |
Tssr34424 | 3 | 16 | - | TSS region | transcription start site region 34424 | |
Tssr34425 | 3 | 11 | - | TSS region | transcription start site region 34425 | |
Gm9169 | 3 | 535 | + | pseudogene | predicted gene 9169 | |
Cpgi13500 | 3 | 1545 | CpG island | CpG island 13500 | ||
Tssr30499 | 3 | 56 | + | TSS region | transcription start site region 30499 | |
Sema6c | 3 | 13567 | + | protein coding gene | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C | |
Tssr30500 | 3 | 4 | + | TSS region | transcription start site region 30500 | |
Tssr30501 | 3 | 16 | + | TSS region | transcription start site region 30501 | |
Tssr30502 | 3 | 24 | + | TSS region | transcription start site region 30502 | |
Cpgi13501 | 3 | 1889 | CpG island | CpG island 13501 | ||
Cpgi13502 | 3 | 280 | CpG island | CpG island 13502 | ||
Gabpb2 | 3 | 36150 | - | protein coding gene | GA repeat binding protein, beta 2 | |
Tssr34426 | 3 | 5 | - | TSS region | transcription start site region 34426 | |
Tssr34427 | 3 | 2 | - | TSS region | transcription start site region 34427 | |
Tssr30503 | 3 | 67 | + | TSS region | transcription start site region 30503 | |
Gm16740 | 3 | 9201 | + | antisense lncRNA gene | predicted gene, 16740 | |
Cpgi13503 | 3 | 704 | CpG island | CpG island 13503 | ||
Tssr34428 | 3 | 38 | - | TSS region | transcription start site region 34428 | |
Tssr34429 | 3 | 24 | - | TSS region | transcription start site region 34429 | |
Tssr34430 | 3 | 41 | - | TSS region | transcription start site region 34430 | |
Tssr34431 | 3 | 58 | - | TSS region | transcription start site region 34431 | |
Tssr30504 | 3 | 59 | + | TSS region | transcription start site region 30504 | |
Tssr30505 | 3 | 12 | + | TSS region | transcription start site region 30505 | |
Mllt11 | 3 | 13036 | - | protein coding gene | myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 | |
Tssr34432 | 3 | 12 | - | TSS region | transcription start site region 34432 | |
Tssr34433 | 3 | 11 | - | TSS region | transcription start site region 34433 | |
Tssr34434 | 3 | 16 | - | TSS region | transcription start site region 34434 | |
Tssr34435 | 3 | 60 | - | TSS region | transcription start site region 34435 | |
Tssr34436 | 3 | 13 | - | TSS region | transcription start site region 34436 | |
Cpgi13504 | 3 | 1640 | CpG island | CpG island 13504 | ||
Tssr34437 | 3 | 17 | - | TSS region | transcription start site region 34437 | |
Tssr34438 | 3 | 92 | - | TSS region | transcription start site region 34438 | |
Tssr34439 | 3 | 11 | - | TSS region | transcription start site region 34439 | |
Tssr34440 | 3 | 11 | - | TSS region | transcription start site region 34440 | |
Tssr34441 | 3 | 13 | - | TSS region | transcription start site region 34441 | |
Tssr30506 | 3 | 58 | + | TSS region | transcription start site region 30506 | |
Tssr34442 | 3 | 7 | - | TSS region | transcription start site region 34442 | |
Tssr34443 | 3 | 38 | - | TSS region | transcription start site region 34443 | |
Tssr34444 | 3 | 83 | - | TSS region | transcription start site region 34444 | |
Cdc42se1 | 3 | 7677 | + | protein coding gene | CDC42 small effector 1 | |
Tssr30507 | 3 | 5 | + | TSS region | transcription start site region 30507 | |
Tssr30508 | 3 | 77 | + | TSS region | transcription start site region 30508 | |
Tssr30509 | 3 | 11 | + | TSS region | transcription start site region 30509 | |
Tssr34445 | 3 | 9 | - | TSS region | transcription start site region 34445 | |
Tssr34446 | 3 | 28 | - | TSS region | transcription start site region 34446 | |
Tssr30510 | 3 | 21 | + | TSS region | transcription start site region 30510 | |
Tssr34447 | 3 | 27 | - | TSS region | transcription start site region 34447 | |
Tssr34448 | 3 | 25 | - | TSS region | transcription start site region 34448 | |
Tssr30511 | 3 | 35 | + | TSS region | transcription start site region 30511 | |
Tssr34449 | 3 | 4 | - | TSS region | transcription start site region 34449 | |
Tssr34450 | 3 | 13 | - | TSS region | transcription start site region 34450 | |
Tssr30512 | 3 | 24 | + | TSS region | transcription start site region 30512 | |
Tssr30513 | 3 | 23 | + | TSS region | transcription start site region 30513 | |
Tssr30514 | 3 | 18 | + | TSS region | transcription start site region 30514 | |
Tssr30515 | 3 | 45 | + | TSS region | transcription start site region 30515 | |
Gm128 | 3 | 4189 | - | protein coding gene | predicted gene 128 | |
Cpgi13505 | 3 | 301 | CpG island | CpG island 13505 | ||
Tssr34451 | 3 | 5 | - | TSS region | transcription start site region 34451 | |
Tssr34452 | 3 | 59 | - | TSS region | transcription start site region 34452 | |
Tssr34453 | 3 | 16 | - | TSS region | transcription start site region 34453 | |
Tssr34454 | 3 | 24 | - | TSS region | transcription start site region 34454 | |
Bnipl | 3 | 9900 | - | protein coding gene | BCL2/adenovirus E1B 19kD interacting protein like | |
Tssr34455 | 3 | 14 | - | TSS region | transcription start site region 34455 | |
Tssr34456 | 3 | 24 | - | TSS region | transcription start site region 34456 | |
Tssr34457 | 3 | 12 | - | TSS region | transcription start site region 34457 | |
Prune1 | 3 | 28402 | - | protein coding gene | prune exopolyphosphatase | |
Tssr34458 | 3 | 45 | - | TSS region | transcription start site region 34458 | |
Cpgi13506 | 3 | 744 | CpG island | CpG island 13506 | ||
Tssr30516 | 3 | 20 | + | TSS region | transcription start site region 30516 | |
Tssr30517 | 3 | 33 | + | TSS region | transcription start site region 30517 | |
Tssr34459 | 3 | 24 | - | TSS region | transcription start site region 34459 | |
Tssr34460 | 3 | 38 | - | TSS region | transcription start site region 34460 | |
Tssr34461 | 3 | 31 | - | TSS region | transcription start site region 34461 | |
Tssr34462 | 3 | 19 | - | TSS region | transcription start site region 34462 | |
Tssr34463 | 3 | 10 | - | TSS region | transcription start site region 34463 | |
Tssr30518 | 3 | 22 | + | TSS region | transcription start site region 30518 | |
Tssr30519 | 3 | 57 | + | TSS region | transcription start site region 30519 | |
Mindy1 | 3 | 13663 | + | protein coding gene | MINDY lysine 48 deubiquitinase 1 | |
Tssr30520 | 3 | 18 | + | TSS region | transcription start site region 30520 | |
Cpgi13507 | 3 | 848 | CpG island | CpG island 13507 | ||
Tssr30521 | 3 | 45 | + | TSS region | transcription start site region 30521 | |
Tssr30522 | 3 | 9 | + | TSS region | transcription start site region 30522 | |
Tssr30523 | 3 | 11 | + | TSS region | transcription start site region 30523 | |
Tssr30524 | 3 | 13 | + | TSS region | transcription start site region 30524 | |
Tssr30525 | 3 | 43 | + | TSS region | transcription start site region 30525 | |
Tssr969 | 3 | 24 | - | TSS region | transcription start site region 969 | |
Tssr30526 | 3 | 38 | + | TSS region | transcription start site region 30526 | |
Tssr30527 | 3 | 14 | + | TSS region | transcription start site region 30527 | |
Tssr30528 | 3 | 24 | + | TSS region | transcription start site region 30528 | |
Tssr30529 | 3 | 12 | + | TSS region | transcription start site region 30529 | |
Tssr30530 | 3 | 13 | + | TSS region | transcription start site region 30530 | |
Tssr30531 | 3 | 31 | + | TSS region | transcription start site region 30531 | |
Tssr30532 | 3 | 10 | + | TSS region | transcription start site region 30532 | |
Tssr34464 | 3 | 79 | - | TSS region | transcription start site region 34464 | |
Tssr30533 | 3 | 11 | + | TSS region | transcription start site region 30533 | |
Tssr30534 | 3 | 73 | + | TSS region | transcription start site region 30534 | |
Tssr34465 | 3 | 48 | - | TSS region | transcription start site region 34465 | |
Tssr30535 | 3 | 44 | + | TSS region | transcription start site region 30535 | |
Tssr30536 | 3 | 14 | + | TSS region | transcription start site region 30536 | |
Tssr34466 | 3 | 45 | - | TSS region | transcription start site region 34466 | |
Anxa9 | 3 | 11080 | - | protein coding gene | annexin A9 | |
Tssr34467 | 3 | 16 | - | TSS region | transcription start site region 34467 | |
6330562C20Rik | 3 | 8051 | - | antisense lncRNA gene | RIKEN cDNA 6330562C20 gene | |
Tssr34468 | 3 | 49 | - | TSS region | transcription start site region 34468 | |
Tssr34469 | 3 | 16 | - | TSS region | transcription start site region 34469 | |
Tssr34470 | 3 | 10 | - | TSS region | transcription start site region 34470 | |
Cpgi13508 | 3 | 1070 | CpG island | CpG island 13508 | ||
Cers2 | 3 | 8794 | + | protein coding gene | ceramide synthase 2 | |
Tssr30537 | 3 | 34 | + | TSS region | transcription start site region 30537 | |
Tssr34471 | 3 | 17 | - | TSS region | transcription start site region 34471 | |
Tssr34472 | 3 | 65 | - | TSS region | transcription start site region 34472 | |
Tssr30538 | 3 | 33 | + | TSS region | transcription start site region 30538 | |
Tssr30539 | 3 | 20 | + | TSS region | transcription start site region 30539 | |
Tssr34473 | 3 | 26 | - | TSS region | transcription start site region 34473 | |
Tssr30540 | 3 | 11 | + | TSS region | transcription start site region 30540 | |
Tssr30541 | 3 | 18 | + | TSS region | transcription start site region 30541 | |
Tssr30542 | 3 | 46 | + | TSS region | transcription start site region 30542 | |
Tssr30543 | 3 | 9 | + | TSS region | transcription start site region 30543 | |
Tssr30544 | 3 | 18 | + | TSS region | transcription start site region 30544 | |
Tssr30545 | 3 | 36 | + | TSS region | transcription start site region 30545 | |
Tssr30546 | 3 | 23 | + | TSS region | transcription start site region 30546 | |
Tssr30547 | 3 | 22 | + | TSS region | transcription start site region 30547 |