Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:94883083-94994758

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Psmb4	3	94884324 to 94886958	2634	-	protein coding gene	proteasome (prosome, macropain) subunit, beta type 4
Cpgi13491	3	94886356 to 94887116	760		CpG island	CpG island 13491
Tssr34408	3	94886920 to 94886942	22	-	TSS region	transcription start site region 34408
Tssr34409	3	94886945 to 94886956	11	-	TSS region	transcription start site region 34409
Tssr30475	3	94886966 to 94886998	32	+	TSS region	transcription start site region 30475
D3Mit140	3	94890489 to 94890610	121		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 140
Gm36237	3	94917965 to 94923003	5038	+	lncRNA gene	predicted gene, 36237
Gm26279	3	94920322 to 94920423	101	-	snRNA gene	predicted gene, 26279
Tssr30476	3	94933041 to 94933073	32	+	TSS region	transcription start site region 30476
Selenbp1	3	94933083 to 94944758	11675	+	protein coding gene	selenium binding protein 1
Tssr30477	3	94933101 to 94933108	7	+	TSS region	transcription start site region 30477
D3Umi6	3	94952905 to 94953142	237		DNA segment	DNA segment, Chr 3, University of Michigan 6
4930532J02Rik	3	94953307 to 94953986	679		unclassified gene	RIKEN cDNA 4930532J02 gene
Cpgi13492	3	94954025 to 94954601	576		CpG island	CpG island 13492
Rfx5	3	94954075 to 94961561	7486	+	protein coding gene	regulatory factor X, 5 (influences HLA class II expression)
Tssr30478	3	94954119 to 94954220	101	+	TSS region	transcription start site region 30478
B230398E01Rik	3	94959034 to 94962048	3014	-	antisense lncRNA gene	RIKEN cDNA B230398E01 gene
Cpgi13493	3	94974572 to 94975378	806		CpG island	CpG island 13493
Tssr30479	3	94974693 to 94974719	26	+	TSS region	transcription start site region 30479
Tssr30480	3	94974728 to 94974753	25	+	TSS region	transcription start site region 30480
Pi4kb	3	94974731 to 95006843	32112	+	protein coding gene	phosphatidylinositol 4-kinase beta
Tssr30481	3	94974757 to 94974768	11	+	TSS region	transcription start site region 30481
Tssr30482	3	94974911 to 94974964	53	+	TSS region	transcription start site region 30482
Tssr30483	3	94974968 to 94974990	22	+	TSS region	transcription start site region 30483
Tssr34410	3	94979894 to 94979900	6	-	TSS region	transcription start site region 34410
D3Umi7	3	94983983 to 94984798	815		DNA segment	DNA segment, Chr 3, University of Michigan 7
Tssr966	3	94984836 to 94984850	14	+	TSS region	transcription start site region 966
A730011C13Rik	3	94994410 to 94997350	2940	-	antisense lncRNA gene	RIKEN cDNA A730011C13 gene