MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:94403273-94444668

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lingo4	3	94399219 to 94404501	5282	+	protein coding gene	leucine rich repeat and Ig domain containing 4
1700040D17Rik	3	94409395 to 94412919	3524	-	lincRNA gene	RIKEN cDNA 1700040D17 gene
Cpgi13481	3	94412459 to 94413591	1132		CpG island	CpG island 13481
Tssr34383	3	94412887 to 94412890	3	-	TSS region	transcription start site region 34383
Tssr30448	3	94413244 to 94413296	52	+	TSS region	transcription start site region 30448
Tdrkh	3	94413273 to 94434668	21395	+	protein coding gene	tudor and KH domain containing protein
Gm42463	3	94413401 to 94418286	4885	+	sense intronic lncRNA gene	predicted gene 42463
Tssr34384	3	94417954 to 94417956	2	-	TSS region	transcription start site region 34384
Gm42464	3	94421661 to 94422434	773	-	pseudogene	predicted gene 42464
Oaz3	3	94433387 to 94436651	3264	-	protein coding gene	ornithine decarboxylase antizyme 3
D3Umi3	3	94435736 to 94436175	439		DNA segment	DNA segment, Chr 3, University of Michigan 3
Tssr34385	3	94435888 to 94435893	5	-	TSS region	transcription start site region 34385
Tssr34386	3	94436079 to 94436090	11	-	TSS region	transcription start site region 34386
Tssr34387	3	94436574 to 94436592	18	-	TSS region	transcription start site region 34387
Cpgi13482	3	94443125 to 94443920	795		CpG island	CpG island 13482
Mrpl9	3	94443154 to 94448708	5554	+	protein coding gene	mitochondrial ribosomal protein L9
Tssr30449	3	94443286 to 94443295	9	+	TSS region	transcription start site region 30449
Tssr30450	3	94443315 to 94443345	30	+	TSS region	transcription start site region 30450