Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Rorc | 3 | 25482 | + | protein coding gene | RAR-related orphan receptor gamma | |
Tssr30439 | 3 | 3 | + | TSS region | transcription start site region 30439 | |
Tssr30440 | 3 | 11 | + | TSS region | transcription start site region 30440 | |
Tssr30441 | 3 | 19 | + | TSS region | transcription start site region 30441 | |
Tssr30442 | 3 | 20 | + | TSS region | transcription start site region 30442 | |
Tssr34382 | 3 | 12 | - | TSS region | transcription start site region 34382 | |
Tssr30443 | 3 | 37 | + | TSS region | transcription start site region 30443 | |
Tssr30444 | 3 | 7 | + | TSS region | transcription start site region 30444 | |
Tssr30445 | 3 | 7 | + | TSS region | transcription start site region 30445 | |
Gm43401 | 3 | 9877 | - | antisense lncRNA gene | predicted gene 43401 | |
Tssr30446 | 3 | 3 | + | TSS region | transcription start site region 30446 | |
Cpgi13480 | 3 | 180 | CpG island | CpG island 13480 | ||
Lingo4 | 3 | 5282 | + | protein coding gene | leucine rich repeat and Ig domain containing 4 | |
Tssr30447 | 3 | 61 | + | TSS region | transcription start site region 30447 | |
1700040D17Rik | 3 | 3524 | - | lincRNA gene | RIKEN cDNA 1700040D17 gene | |
Cpgi13481 | 3 | 1132 | CpG island | CpG island 13481 | ||
Tssr34383 | 3 | 3 | - | TSS region | transcription start site region 34383 | |
Tssr30448 | 3 | 52 | + | TSS region | transcription start site region 30448 | |
Tdrkh | 3 | 21395 | + | protein coding gene | tudor and KH domain containing protein | |
Gm42463 | 3 | 4885 | + | sense intronic lncRNA gene | predicted gene 42463 | |
Tssr34384 | 3 | 2 | - | TSS region | transcription start site region 34384 | |
Gm42464 | 3 | 773 | - | pseudogene | predicted gene 42464 | |
Oaz3 | 3 | 3264 | - | protein coding gene | ornithine decarboxylase antizyme 3 | |
D3Umi3 | 3 | 439 | DNA segment | DNA segment, Chr 3, University of Michigan 3 | ||
Tssr34385 | 3 | 5 | - | TSS region | transcription start site region 34385 | |
Tssr34386 | 3 | 11 | - | TSS region | transcription start site region 34386 | |
Tssr34387 | 3 | 18 | - | TSS region | transcription start site region 34387 | |
Cpgi13482 | 3 | 795 | CpG island | CpG island 13482 | ||
Mrpl9 | 3 | 5554 | + | protein coding gene | mitochondrial ribosomal protein L9 | |
Tssr30449 | 3 | 9 | + | TSS region | transcription start site region 30449 | |
Tssr30450 | 3 | 30 | + | TSS region | transcription start site region 30450 | |
Gm30023 | 3 | 888 | + | pseudogene | predicted gene, 30023 | |
Riiad1 | 3 | 15306 | - | protein coding gene | regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 | |
Cpgi13483 | 3 | 252 | CpG island | CpG island 13483 | ||
Tssr34388 | 3 | 5 | - | TSS region | transcription start site region 34388 | |
Tssr34389 | 3 | 18 | - | TSS region | transcription start site region 34389 | |
Tssr34390 | 3 | 38 | - | TSS region | transcription start site region 34390 | |
Celf3 | 3 | 13903 | + | protein coding gene | CUGBP, Elav-like family member 3 | |
Tssr30451 | 3 | 21 | + | TSS region | transcription start site region 30451 | |
Tssr30452 | 3 | 12 | + | TSS region | transcription start site region 30452 | |
Tssr30453 | 3 | 21 | + | TSS region | transcription start site region 30453 | |
Gm46813 | 3 | 645 | - | lncRNA gene | predicted gene, 46813 | |
Cpgi13484 | 3 | 422 | CpG island | CpG island 13484 | ||
Tssr34391 | 3 | 13 | - | TSS region | transcription start site region 34391 | |
Tssr30454 | 3 | 11 | + | TSS region | transcription start site region 30454 | |
Tssr30455 | 3 | 13 | + | TSS region | transcription start site region 30455 | |
Tssr30456 | 3 | 39 | + | TSS region | transcription start site region 30456 | |
D3Umi4 | 3 | 449 | DNA segment | DNA segment, Chr 3, University of Michigan 4 | ||
Tssr30457 | 3 | 1 | + | TSS region | transcription start site region 30457 | |
Tssr30458 | 3 | 1 | + | TSS region | transcription start site region 30458 | |
Tssr30459 | 3 | 16 | + | TSS region | transcription start site region 30459 | |
Tssr30460 | 3 | 18 | + | TSS region | transcription start site region 30460 | |
Tssr30461 | 3 | 18 | + | TSS region | transcription start site region 30461 | |
Snx27 | 3 | 85172 | - | protein coding gene | sorting nexin family member 27 | |
Tssr34392 | 3 | 10 | - | TSS region | transcription start site region 34392 | |
D13Mgi25 | 3 | 736 | DNA segment | DNA Segment, Chr 13, Mouse Genome Informatics 25 | ||
Gm43773 | 3 | 2161 | - | sense intronic lncRNA gene | predicted gene 43773 | |
Gm43774 | 3 | 877 | - | sense intronic lncRNA gene | predicted gene 43774 | |
Tssr34393 | 3 | 26 | - | TSS region | transcription start site region 34393 | |
Gm43768 | 3 | 1257 | - | sense intronic lncRNA gene | predicted gene 43768 | |
Tssr34394 | 3 | 12 | - | TSS region | transcription start site region 34394 | |
Cpgi13485 | 3 | 1082 | CpG island | CpG island 13485 | ||
Tssr34395 | 3 | 25 | - | TSS region | transcription start site region 34395 | |
Tssr34396 | 3 | 12 | - | TSS region | transcription start site region 34396 | |
Tssr34397 | 3 | 21 | - | TSS region | transcription start site region 34397 | |
Tssr34398 | 3 | 21 | - | TSS region | transcription start site region 34398 | |
Tssr34399 | 3 | 11 | - | TSS region | transcription start site region 34399 | |
Tssr34400 | 3 | 30 | - | TSS region | transcription start site region 34400 | |
Gm15235 | 3 | 193 | + | pseudogene | predicted gene 15235 | |
Tssr30462 | 3 | 7 | + | TSS region | transcription start site region 30462 | |
Rpl31-ps11 | 3 | 376 | - | pseudogene | ribosomal protein L31, pseudogene 11 | |
Tuft1 | 3 | 46115 | - | protein coding gene | tuftelin 1 | |
Gm10972 | 3 | 488 | + | protein coding gene | predicted gene 10972 | |
Cpgi13486 | 3 | 232 | CpG island | CpG island 13486 | ||
Tssr34401 | 3 | 35 | - | TSS region | transcription start site region 34401 | |
Gm15234 | 3 | 1154 | + | lincRNA gene | predicted gene 15234 | |
BC021767 | 3 | 6563 | - | pseudogene | cDNA sequence BC021767 | |
Cpgi13487 | 3 | 160 | CpG island | CpG island 13487 | ||
Gm46814 | 3 | 7458 | + | lncRNA gene | predicted gene, 46814 | |
Tssr34402 | 3 | 15 | - | TSS region | transcription start site region 34402 | |
Tssr30463 | 3 | 7 | + | TSS region | transcription start site region 30463 | |
Tssr30464 | 3 | 6 | + | TSS region | transcription start site region 30464 | |
Selenbp2 | 3 | 10833 | + | protein coding gene | selenium binding protein 2 | |
Tssr30465 | 3 | 3 | + | TSS region | transcription start site region 30465 | |
Gm15264 | 3 | 38093 | - | pseudogene | predicted gene 15264 | |
Gm43711 | 3 | 372 | + | pseudogene | predicted gene 43711 | |
Tssr34403 | 3 | 5 | - | TSS region | transcription start site region 34403 | |
Cgn | 3 | 26423 | - | protein coding gene | cingulin | |
D3Umi5 | 3 | 219 | DNA segment | DNA segment, Chr 3, University of Michigan 5 | ||
Tssr34404 | 3 | 10 | - | TSS region | transcription start site region 34404 | |
Cpgi13488 | 3 | 908 | CpG island | CpG island 13488 | ||
Tssr34405 | 3 | 36 | - | TSS region | transcription start site region 34405 | |
Tssr34406 | 3 | 21 | - | TSS region | transcription start site region 34406 | |
Tssr30466 | 3 | 16 | + | TSS region | transcription start site region 30466 | |
Tssr30467 | 3 | 11 | + | TSS region | transcription start site region 30467 | |
Gm40094 | 3 | 1461 | + | lncRNA gene | predicted gene, 40094 | |
Cpgi13489 | 3 | 489 | CpG island | CpG island 13489 | ||
Gm15263 | 3 | 553 | + | pseudogene | predicted gene 15263 | |
Cpgi13490 | 3 | 1154 | CpG island | CpG island 13490 | ||
Tssr30468 | 3 | 39 | + | TSS region | transcription start site region 30468 | |
Tssr30469 | 3 | 30 | + | TSS region | transcription start site region 30469 | |
Tssr30470 | 3 | 31 | + | TSS region | transcription start site region 30470 | |
Pogz | 3 | 44759 | + | protein coding gene | pogo transposable element with ZNF domain | |
Tssr30471 | 3 | 16 | + | TSS region | transcription start site region 30471 | |
Tssr30472 | 3 | 11 | + | TSS region | transcription start site region 30472 | |
Tssr30473 | 3 | 21 | + | TSS region | transcription start site region 30473 | |
Tssr34407 | 3 | 6 | - | TSS region | transcription start site region 34407 | |
Tssr30474 | 3 | 12 | + | TSS region | transcription start site region 30474 | |
Psmb4 | 3 | 2634 | - | protein coding gene | proteasome (prosome, macropain) subunit, beta type 4 | |
Cpgi13491 | 3 | 760 | CpG island | CpG island 13491 | ||
Tssr34408 | 3 | 22 | - | TSS region | transcription start site region 34408 | |
Tssr34409 | 3 | 11 | - | TSS region | transcription start site region 34409 | |
Tssr30475 | 3 | 32 | + | TSS region | transcription start site region 30475 | |
D3Mit140 | 3 | 121 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 140 | ||
Gm36237 | 3 | 5038 | + | lncRNA gene | predicted gene, 36237 | |
Gm26279 | 3 | 101 | - | snRNA gene | predicted gene, 26279 | |
Tssr30476 | 3 | 32 | + | TSS region | transcription start site region 30476 | |
Selenbp1 | 3 | 11675 | + | protein coding gene | selenium binding protein 1 | |
Tssr30477 | 3 | 7 | + | TSS region | transcription start site region 30477 | |
D3Umi6 | 3 | 237 | DNA segment | DNA segment, Chr 3, University of Michigan 6 | ||
4930532J02Rik | 3 | 679 | unclassified gene | RIKEN cDNA 4930532J02 gene | ||
Cpgi13492 | 3 | 576 | CpG island | CpG island 13492 | ||
Rfx5 | 3 | 7486 | + | protein coding gene | regulatory factor X, 5 (influences HLA class II expression) | |
Tssr30478 | 3 | 101 | + | TSS region | transcription start site region 30478 |