Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:94372741-94412748

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rorc 3 94372794 to 94398276 25482 + protein coding gene RAR-related orphan receptor gamma
Tssr30431 3 94372811 to 94372872 61 + TSS region transcription start site region 30431
Tssr30432 3 94372886 to 94372887 1 + TSS region transcription start site region 30432
Tssr34378 3 94375237 to 94375241 4 - TSS region transcription start site region 34378
Tssr34379 3 94377236 to 94377250 14 - TSS region transcription start site region 34379
Tssr34380 3 94377254 to 94377281 27 - TSS region transcription start site region 34380
Tssr34381 3 94377284 to 94377290 6 - TSS region transcription start site region 34381
Tssr30433 3 94377409 to 94377423 14 + TSS region transcription start site region 30433
Tssr30434 3 94377433 to 94377451 18 + TSS region transcription start site region 30434
Tssr30435 3 94377454 to 94377481 27 + TSS region transcription start site region 30435
Tssr30436 3 94377486 to 94377497 11 + TSS region transcription start site region 30436
Tssr30437 3 94377505 to 94377527 22 + TSS region transcription start site region 30437
Tssr30438 3 94377539 to 94377550 11 + TSS region transcription start site region 30438
Tssr30439 3 94385679 to 94385682 3 + TSS region transcription start site region 30439
Tssr30440 3 94386917 to 94386928 11 + TSS region transcription start site region 30440
Tssr30441 3 94386955 to 94386974 19 + TSS region transcription start site region 30441
Tssr30442 3 94387031 to 94387051 20 + TSS region transcription start site region 30442
Tssr34382 3 94388152 to 94388164 12 - TSS region transcription start site region 34382
Tssr30443 3 94388253 to 94388290 37 + TSS region transcription start site region 30443
Tssr30444 3 94388294 to 94388301 7 + TSS region transcription start site region 30444
Tssr30445 3 94392741 to 94392748 7 + TSS region transcription start site region 30445
Gm43401 3 94392971 to 94402848 9877 - antisense lncRNA gene predicted gene 43401
Tssr30446 3 94398535 to 94398538 3 + TSS region transcription start site region 30446
Cpgi13480 3 94399118 to 94399298 180 CpG island CpG island 13480
Lingo4 3 94399219 to 94404501 5282 + protein coding gene leucine rich repeat and Ig domain containing 4
Tssr30447 3 94399272 to 94399333 61 + TSS region transcription start site region 30447
1700040D17Rik 3 94409395 to 94412919 3524 - lincRNA gene RIKEN cDNA 1700040D17 gene
Cpgi13481 3 94412459 to 94413591 1132 CpG island CpG island 13481