Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:94260108-94382540

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm4778	3	94264036 to 94266784	2748	+	protein coding gene	predicted gene 4778
Gm16561	3	94275233 to 94275424	191	-	pseudogene	predicted gene 16561
Gm36010	3	94277974 to 94309988	32014	-	lncRNA gene	predicted gene, 36010
Cpgi13478	3	94309758 to 94310476	718		CpG island	CpG island 13478
Tssr30425	3	94310095 to 94310144	49	+	TSS region	transcription start site region 30425
Them4	3	94310108 to 94332540	22432	+	protein coding gene	thioesterase superfamily member 4
Tssr30426	3	94310155 to 94310171	16	+	TSS region	transcription start site region 30426
Tssr30427	3	94310237 to 94310270	33	+	TSS region	transcription start site region 30427
Gm43743	3	94334394 to 94335332	938	-	pseudogene	predicted gene 43743
Tssr30428	3	94342092 to 94342112	20	+	TSS region	transcription start site region 30428
Them5	3	94342099 to 94347352	5253	+	protein coding gene	thioesterase superfamily member 5
Tssr30429	3	94342117 to 94342124	7	+	TSS region	transcription start site region 30429
Tssr30430	3	94342139 to 94342144	5	+	TSS region	transcription start site region 30430
Gm36070	3	94356507 to 94360842	4335	-	unclassified non-coding RNA gene	predicted gene, 36070
C2cd4d	3	94362444 to 94364567	2123	+	protein coding gene	C2 calcium-dependent domain containing 4D
Cpgi13479	3	94363256 to 94364516	1260		CpG island	CpG island 13479
Gm38411	3	94365535 to 94371023	5488	-	antisense lncRNA gene	predicted gene, 38411
Tssr34377	3	94369633 to 94369637	4	-	TSS region	transcription start site region 34377
Rorc	3	94372794 to 94398276	25482	+	protein coding gene	RAR-related orphan receptor gamma
Tssr30431	3	94372811 to 94372872	61	+	TSS region	transcription start site region 30431
Tssr30432	3	94372886 to 94372887	1	+	TSS region	transcription start site region 30432
Tssr34378	3	94375237 to 94375241	4	-	TSS region	transcription start site region 34378
Tssr34379	3	94377236 to 94377250	14	-	TSS region	transcription start site region 34379
Tssr34380	3	94377254 to 94377281	27	-	TSS region	transcription start site region 34380
Tssr34381	3	94377284 to 94377290	6	-	TSS region	transcription start site region 34381
Tssr30433	3	94377409 to 94377423	14	+	TSS region	transcription start site region 30433
Tssr30434	3	94377433 to 94377451	18	+	TSS region	transcription start site region 30434
Tssr30435	3	94377454 to 94377481	27	+	TSS region	transcription start site region 30435
Tssr30436	3	94377486 to 94377497	11	+	TSS region	transcription start site region 30436
Tssr30437	3	94377505 to 94377527	22	+	TSS region	transcription start site region 30437
Tssr30438	3	94377539 to 94377550	11	+	TSS region	transcription start site region 30438