Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:93445126-93665152

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm37245 3 93306468 to 93465359 158891 - lincRNA gene predicted gene, 37245
Tchh 3 93442330 to 93449077 6747 + protein coding gene trichohyalin
Cpgi13475 3 93443525 to 93448020 4495 CpG island CpG island 13475
Tssr962 3 93445123 to 93445126 3 + TSS region transcription start site region 962
Tssr34366 3 93445140 to 93445167 27 - TSS region transcription start site region 34366
Tssr963 3 93445160 to 93445162 2 + TSS region transcription start site region 963
Tssr30387 3 93445192 to 93445208 16 + TSS region transcription start site region 30387
Tssr30388 3 93445218 to 93445227 9 + TSS region transcription start site region 30388
Tssr30389 3 93445232 to 93445249 17 + TSS region transcription start site region 30389
Tssr964 3 93445256 to 93445261 5 + TSS region transcription start site region 964
Tssr34367 3 93445273 to 93445332 59 - TSS region transcription start site region 34367
Tssr30390 3 93445304 to 93445320 16 + TSS region transcription start site region 30390
Tssr30391 3 93445323 to 93445330 7 + TSS region transcription start site region 30391
Tssr30392 3 93445341 to 93445348 7 + TSS region transcription start site region 30392
Tssr34368 3 93445352 to 93445362 10 - TSS region transcription start site region 34368
Tssr30393 3 93445358 to 93445359 1 + TSS region transcription start site region 30393
Tssr34369 3 93445377 to 93445388 11 - TSS region transcription start site region 34369
Tssr30394 3 93445378 to 93445385 7 + TSS region transcription start site region 30394
Tssr34370 3 93445391 to 93445414 23 - TSS region transcription start site region 34370
Tssr30395 3 93445403 to 93445412 9 + TSS region transcription start site region 30395
Tssr34371 3 93445445 to 93445557 112 - TSS region transcription start site region 34371
Tssr30396 3 93445452 to 93445462 10 + TSS region transcription start site region 30396
Tssr30397 3 93445469 to 93445478 9 + TSS region transcription start site region 30397
Tssr30398 3 93445544 to 93445556 12 + TSS region transcription start site region 30398
Tssr30399 3 93445591 to 93445635 44 + TSS region transcription start site region 30399
Tssr30400 3 93446076 to 93446084 8 + TSS region transcription start site region 30400
Tssr30401 3 93446096 to 93446105 9 + TSS region transcription start site region 30401
Tssr30402 3 93446195 to 93446205 10 + TSS region transcription start site region 30402
Tssr34372 3 93446208 to 93446218 10 - TSS region transcription start site region 34372
Tssr30403 3 93446235 to 93446242 7 + TSS region transcription start site region 30403
Tssr30404 3 93447373 to 93447381 8 + TSS region transcription start site region 30404
Tssr34373 3 93447376 to 93447403 27 - TSS region transcription start site region 34373
Tssr30405 3 93447484 to 93447496 12 + TSS region transcription start site region 30405
Tssr30406 3 93447632 to 93447643 11 + TSS region transcription start site region 30406
Tssr30407 3 93447827 to 93447833 6 + TSS region transcription start site region 30407
Tssr34374 3 93465356 to 93465361 5 - TSS region transcription start site region 34374
Tssr30408 3 93468751 to 93468756 5 + TSS region transcription start site region 30408
Tchhl1 3 93468754 to 93471980 3226 + protein coding gene trichohyalin-like 1
Tssr30409 3 93470679 to 93470687 8 + TSS region transcription start site region 30409
D3Umi2 3 93482556 to 93482691 135 DNA segment DNA segment, Chr 3, University of Michigan 2
Gm36953 3 93499815 to 93500300 485 - pseudogene predicted gene, 36953
Tssr34375 3 93500322 to 93500334 12 - TSS region transcription start site region 34375
Tssr965 3 93505015 to 93505023 8 + TSS region transcription start site region 965
Tssr30410 3 93505048 to 93505092 44 + TSS region transcription start site region 30410
Tssr30411 3 93506582 to 93506601 19 + TSS region transcription start site region 30411
Tssr30412 3 93506606 to 93506613 7 + TSS region transcription start site region 30412
Tssr34376 3 93511168 to 93511185 17 - TSS region transcription start site region 34376
Tssr30413 3 93511275 to 93511296 21 + TSS region transcription start site region 30413
Tssr30414 3 93511297 to 93511320 23 + TSS region transcription start site region 30414
Tssr30415 3 93520369 to 93520391 22 + TSS region transcription start site region 30415
Tssr30416 3 93520473 to 93520501 28 + TSS region transcription start site region 30416
S100a11 3 93520496 to 93526288 5792 + protein coding gene S100 calcium binding protein A11
Cpgi13476 3 93520799 to 93520996 197 CpG island CpG island 13476
Tssr30417 3 93526054 to 93526090 36 + TSS region transcription start site region 30417
Gm29950 3 93530509 to 93530745 236 - pseudogene predicted gene, 29950
Tssr30418 3 93547940 to 93547951 11 + TSS region transcription start site region 30418
Cpgi13477 3 93555045 to 93555449 404 CpG island CpG island 13477
S100a10 3 93555080 to 93564643 9563 + protein coding gene S100 calcium binding protein A10 (calpactin)
Tssr30419 3 93555111 to 93555122 11 + TSS region transcription start site region 30419
Tssr30420 3 93555126 to 93555152 26 + TSS region transcription start site region 30420
Tssr30421 3 93555155 to 93555171 16 + TSS region transcription start site region 30421
Tssr30422 3 93560936 to 93560945 9 + TSS region transcription start site region 30422
Gm40093 3 93595359 to 93597504 2145 - lncRNA gene predicted gene, 40093
Gm18331 3 93605168 to 93605714 546 + pseudogene predicted gene, 18331
Gm5541 3 93628640 to 93629752 1112 - pseudogene predicted gene 5541
Gm38207 3 93638044 to 93641548 3504 + unclassified gene predicted gene, 38207
Tdpoz2 3 93651542 to 93652686 1144 - protein coding gene TD and POZ domain containing 2