Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:9327020-9710085

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm41997	3	9302688 to 9343835	41147	-	lncRNA gene	predicted gene, 41997
Cpgi12971	3	9334234 to 9334513	279		CpG island	CpG island 12971
Cpgi12972	3	9346848 to 9347257	409		CpG island	CpG island 12972
Cpgi12973	3	9365252 to 9365557	305		CpG island	CpG island 12973
Gm22604	3	9402175 to 9402485	310	+	unclassified non-coding RNA gene	predicted gene, 22604
Tssr28343	3	9402994 to 9403027	33	+	TSS region	transcription start site region 28343
Tssr28344	3	9403049 to 9403092	43	+	TSS region	transcription start site region 28344
C030034L19Rik	3	9403078 to 9413903	10825	+	lincRNA gene	RIKEN cDNA C030034L19 gene
Tssr28345	3	9403111 to 9403130	19	+	TSS region	transcription start site region 28345
Zfp704	3	9427020 to 9610085	183065	-	protein coding gene	zinc finger protein 704
Tssr32577	3	9443912 to 9443914	2	-	TSS region	transcription start site region 32577
Gm38001	3	9496168 to 9499928	3760	+	unclassified gene	predicted gene, 38001
Cpgi12974	3	9608594 to 9610516	1922		CpG island	CpG island 12974
Tssr28346	3	9608803 to 9608824	21	+	TSS region	transcription start site region 28346
Tssr28347	3	9608826 to 9608841	15	+	TSS region	transcription start site region 28347
Tssr32578	3	9610033 to 9610040	7	-	TSS region	transcription start site region 32578
Tssr32579	3	9610074 to 9610086	12	-	TSS region	transcription start site region 32579
Tssr32580	3	9610090 to 9610124	34	-	TSS region	transcription start site region 32580
Tssr32581	3	9610233 to 9610247	14	-	TSS region	transcription start site region 32581
Tssr32582	3	9623519 to 9623528	9	-	TSS region	transcription start site region 32582
Cpgi12975	3	9629957 to 9630108	151		CpG island	CpG island 12975
Gm33169	3	9646323 to 9663118	16795	-	lncRNA gene	predicted gene, 33169
Gm17806	3	9656520 to 9656902	382	+	pseudogene	predicted gene, 17806
Tssr28348	3	9658352 to 9658359	7	+	TSS region	transcription start site region 28348
Tssr28349	3	9658371 to 9658378	7	+	TSS region	transcription start site region 28349
D3Mit202	3	9669772 to 9669910	138		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 202
Pag1	3	9687479 to 9833679	146200	-	protein coding gene	phosphoprotein associated with glycosphingolipid microdomains 1
Tssr32583	3	9705000 to 9705004	4	-	TSS region	transcription start site region 32583