Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:92690086-97940103

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1409 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm4202 3 92689425 to 92690151 726 + pseudogene predicted gene 4202
Tssr30311 3 92690953 to 92690964 11 + TSS region transcription start site region 30311
Tssr30312 3 92691002 to 92691008 6 + TSS region transcription start site region 30312
Lce1e 3 92707401 to 92709074 1673 - protein coding gene late cornified envelope 1E
Tssr34328 3 92709073 to 92709075 2 - TSS region transcription start site region 34328
Lce1f 3 92718696 to 92720350 1654 - protein coding gene late cornified envelope 1F
Tssr34329 3 92720344 to 92720359 15 - TSS region transcription start site region 34329
Tssr34330 3 92720381 to 92720387 6 - TSS region transcription start site region 34330
Gm38119 3 92737651 to 92739096 1445 - protein coding gene predicted gene, 38119
Lce1g 3 92750151 to 92752338 2187 - protein coding gene late cornified envelope 1G
Tssr34331 3 92752337 to 92752338 1 - TSS region transcription start site region 34331
Lce1h 3 92763215 to 92765065 1850 - protein coding gene late cornified envelope 1H
Tssr34332 3 92765060 to 92765066 6 - TSS region transcription start site region 34332
Lce1i 3 92777210 to 92778899 1689 - protein coding gene late cornified envelope 1I
Tssr34333 3 92778895 to 92778903 8 - TSS region transcription start site region 34333
Lce1j 3 92788844 to 92790514 1670 - protein coding gene late cornified envelope 1J
Lce1k 3 92806291 to 92807891 1600 - protein coding gene late cornified envelope 1K
Tssr34334 3 92807891 to 92807904 13 - TSS region transcription start site region 34334
Tssr957 3 92813516 to 92813521 5 - TSS region transcription start site region 957
Kprp 3 92823074 to 92827247 4173 - protein coding gene keratinocyte expressed, proline-rich
Cpgi13472 3 92823940 to 92824378 438 CpG island CpG island 13472
Tssr34335 3 92825035 to 92825046 11 - TSS region transcription start site region 34335
Tssr34336 3 92827239 to 92827257 18 - TSS region transcription start site region 34336
Gm38201 3 92843297 to 92843683 386 - lincRNA gene predicted gene, 38201
Lce1l 3 92849949 to 92851286 1337 - protein coding gene late cornified envelope 1L
Tssr34337 3 92851284 to 92851286 2 - TSS region transcription start site region 34337
2310050C09Rik 3 92868359 to 92870205 1846 - protein coding gene RIKEN cDNA 2310050C09 gene
Tssr34338 3 92868995 to 92869007 12 - TSS region transcription start site region 34338
Tssr34339 3 92870215 to 92870224 9 - TSS region transcription start site region 34339
Lce3a 3 92925287 to 92926230 943 - protein coding gene late cornified envelope 3A
Tssr34340 3 92926242 to 92926247 5 - TSS region transcription start site region 34340
Tssr30313 3 92932975 to 92932983 8 + TSS region transcription start site region 30313
Lce3b 3 92932979 to 92934096 1117 + protein coding gene late cornified envelope 3B
Gm38078 3 92937681 to 92938072 391 + pseudogene predicted gene, 38078
Tssr30314 3 92944483 to 92944487 4 + TSS region transcription start site region 30314
Lce3c 3 92944486 to 92945730 1244 + protein coding gene late cornified envelope 3C
Gm24481 3 92949158 to 92949259 101 - snRNA gene predicted gene, 24481
Tssr30315 3 92957386 to 92957389 3 + TSS region transcription start site region 30315
Lce3d 3 92957390 to 92958505 1115 + protein coding gene late cornified envelope 3D
Gm22577 3 92962008 to 92962116 108 - snRNA gene predicted gene, 22577
Tssr30316 3 92967059 to 92967062 3 + TSS region transcription start site region 30316
Lce3e 3 92967061 to 92968281 1220 + protein coding gene late cornified envelope 3E
Tssr30317 3 92992213 to 92992221 8 + TSS region transcription start site region 30317
Lce3f 3 92992226 to 92993426 1200 + protein coding gene late cornified envelope 3F
Crct1 3 93014205 to 93015686 1481 - protein coding gene cysteine-rich C-terminal 1
Cpgi13473 3 93014470 to 93014796 326 CpG island CpG island 13473
Tssr34341 3 93015679 to 93015694 15 - TSS region transcription start site region 34341
D3Mit311 3 93017195 to 93017313 118 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 311
Lce1m 3 93017810 to 93019060 1250 - protein coding gene late cornified envelope 1M
Cpgi13474 3 93018148 to 93018472 324 CpG island CpG island 13474
Tssr34342 3 93019057 to 93019060 3 - TSS region transcription start site region 34342
Gm38040 3 93064740 to 93064964 224 - pseudogene predicted gene, 38040
Gm4858 3 93068823 to 93075505 6682 + protein coding gene predicted gene 4858
Gm35785 3 93097581 to 93128245 30664 - lncRNA gene predicted gene, 35785
Gm37361 3 93100466 to 93100597 131 - pseudogene predicted gene, 37361
Tssr34343 3 93100670 to 93100674 4 - TSS region transcription start site region 34343
Tssr30318 3 93144782 to 93144798 16 + TSS region transcription start site region 30318
Crnn 3 93144787 to 93149471 4684 + protein coding gene cornulin
D3Umi1 3 93148199 to 93148605 406 DNA segment DNA segment, Chr 3, University of Michigan 1
Gm37501 3 93152178 to 93152868 690 + pseudogene predicted gene, 37501
Tssr30319 3 93188582 to 93188600 18 + TSS region transcription start site region 30319
Tssr30320 3 93197270 to 93197284 14 + TSS region transcription start site region 30320
Flg2 3 93197273 to 93221377 24104 + protein coding gene filaggrin family member 2
Gm18432 3 93234919 to 93236176 1257 + pseudogene predicted gene, 18432
D3Mit141.1 3 93237291 to 93237453 162 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 141.1
D3Mit141 3 93237373 to 93237521 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 141
D3Mit141.2 3 93237535 to 93237649 114 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 141.2
Tssr30321 3 93273519 to 93273524 5 + TSS region transcription start site region 30321
Flg 3 93273546 to 93293689 20143 + protein coding gene filaggrin
Tssr30322 3 93277544 to 93277560 16 + TSS region transcription start site region 30322
Tssr30323 3 93277583 to 93277591 8 + TSS region transcription start site region 30323
Tssr958 3 93277607 to 93277627 20 + TSS region transcription start site region 958
Tssr30324 3 93277639 to 93277652 13 + TSS region transcription start site region 30324
Tssr30325 3 93277663 to 93277679 16 + TSS region transcription start site region 30325
Tssr30326 3 93278064 to 93278072 8 + TSS region transcription start site region 30326
Rplp0-ps1 3 93278141 to 93279073 932 + pseudogene ribosomal protein, large, P0, pseudogene 1
Tssr30327 3 93279392 to 93279403 11 + TSS region transcription start site region 30327
Tssr30328 3 93279454 to 93279514 60 + TSS region transcription start site region 30328
Tssr30329 3 93279526 to 93279534 8 + TSS region transcription start site region 30329
Tssr30330 3 93279546 to 93279557 11 + TSS region transcription start site region 30330
Tssr959 3 93279559 to 93279567 8 + TSS region transcription start site region 959
Tssr30331 3 93279581 to 93279607 26 + TSS region transcription start site region 30331
Tssr30332 3 93279608 to 93279611 3 + TSS region transcription start site region 30332
Tssr34344 3 93279629 to 93279694 65 - TSS region transcription start site region 34344
Tssr34345 3 93279702 to 93279743 41 - TSS region transcription start site region 34345
Tssr30333 3 93279706 to 93279718 12 + TSS region transcription start site region 30333
Tssr34346 3 93279759 to 93279764 5 - TSS region transcription start site region 34346
Tssr34347 3 93279808 to 93279822 14 - TSS region transcription start site region 34347
Tssr30334 3 93293059 to 93293066 7 + TSS region transcription start site region 30334
Tssr30335 3 93293079 to 93293098 19 + TSS region transcription start site region 30335
Tssr30336 3 93293108 to 93293119 11 + TSS region transcription start site region 30336
Tssr30337 3 93293132 to 93293147 15 + TSS region transcription start site region 30337
Tssr30338 3 93293166 to 93293186 20 + TSS region transcription start site region 30338
Tssr30339 3 93293326 to 93293333 7 + TSS region transcription start site region 30339
Gm37922 3 93305015 to 93305469 454 + pseudogene predicted gene, 37922
Gm37913 3 93306468 to 93309011 2543 + unclassified gene predicted gene, 37913
Gm37245 3 93306468 to 93465359 158891 - lincRNA gene predicted gene, 37245
Tssr30340 3 93319740 to 93319754 14 + TSS region transcription start site region 30340
Hrnr 3 93319749 to 93333570 13821 + protein coding gene hornerin
Tssr34348 3 93376376 to 93376386 10 - TSS region transcription start site region 34348
Gm44353 3 93388689 to 93388826 137 + miRNA gene predicted gene, 44353
Tssr30341 3 93393696 to 93393699 3 + TSS region transcription start site region 30341
Gm37857 3 93393698 to 93394896 1198 + unclassified gene predicted gene, 37857
Rptn 3 93393699 to 93399442 5743 + protein coding gene repetin
Tssr30342 3 93397933 to 93397944 11 + TSS region transcription start site region 30342
Tssr30343 3 93398213 to 93398226 13 + TSS region transcription start site region 30343
Tssr34349 3 93411973 to 93412004 31 - TSS region transcription start site region 34349
Gm18296 3 93420682 to 93421364 682 - pseudogene predicted gene, 18296
Gm22752 3 93433197 to 93433305 108 - miRNA gene predicted gene, 22752
Gm5278 3 93433215 to 93433766 551 - pseudogene predicted pseudogene 5278
Tssr34350 3 93433848 to 93433854 6 - TSS region transcription start site region 34350
Tssr34351 3 93433940 to 93433962 22 - TSS region transcription start site region 34351
Tssr30344 3 93440761 to 93440764 3 + TSS region transcription start site region 30344
Tchh 3 93442330 to 93449077 6747 + protein coding gene trichohyalin
Tssr30345 3 93442371 to 93442389 18 + TSS region transcription start site region 30345
Tssr30346 3 93442407 to 93442414 7 + TSS region transcription start site region 30346
Tssr960 3 93443427 to 93443430 3 + TSS region transcription start site region 960
Tssr30347 3 93443451 to 93443473 22 + TSS region transcription start site region 30347
Tssr30348 3 93443490 to 93443493 3 + TSS region transcription start site region 30348
Tssr30349 3 93443496 to 93443505 9 + TSS region transcription start site region 30349
Cpgi13475 3 93443525 to 93448020 4495 CpG island CpG island 13475
Tssr30350 3 93443538 to 93443549 11 + TSS region transcription start site region 30350
Tssr30351 3 93443569 to 93443573 4 + TSS region transcription start site region 30351
Tssr30352 3 93443618 to 93443623 5 + TSS region transcription start site region 30352
Tssr30353 3 93443630 to 93443642 12 + TSS region transcription start site region 30353
Tssr30354 3 93443648 to 93443657 9 + TSS region transcription start site region 30354
Tssr30355 3 93443667 to 93443676 9 + TSS region transcription start site region 30355
Tssr30356 3 93443680 to 93443730 50 + TSS region transcription start site region 30356
Tssr30357 3 93443778 to 93443785 7 + TSS region transcription start site region 30357
Tssr34352 3 93443864 to 93443884 20 - TSS region transcription start site region 34352
Tssr34353 3 93443885 to 93443890 5 - TSS region transcription start site region 34353
Tssr30358 3 93443893 to 93443903 10 + TSS region transcription start site region 30358
Tssr34354 3 93443895 to 93443941 46 - TSS region transcription start site region 34354
Tssr30359 3 93443922 to 93443929 7 + TSS region transcription start site region 30359
Tssr30360 3 93443952 to 93443959 7 + TSS region transcription start site region 30360
Tssr961 3 93444003 to 93444006 3 + TSS region transcription start site region 961
Tssr34355 3 93444033 to 93444038 5 - TSS region transcription start site region 34355
Tssr30361 3 93444277 to 93444284 7 + TSS region transcription start site region 30361
Tssr30362 3 93444291 to 93444300 9 + TSS region transcription start site region 30362
Tssr30363 3 93444434 to 93444442 8 + TSS region transcription start site region 30363
Tssr30364 3 93444505 to 93444514 9 + TSS region transcription start site region 30364
Tssr30365 3 93444540 to 93444549 9 + TSS region transcription start site region 30365
Tssr30366 3 93444592 to 93444602 10 + TSS region transcription start site region 30366
Tssr30367 3 93444636 to 93444641 5 + TSS region transcription start site region 30367
Tssr30368 3 93444653 to 93444665 12 + TSS region transcription start site region 30368
Tssr30369 3 93444666 to 93444669 3 + TSS region transcription start site region 30369
Tssr30370 3 93444673 to 93444678 5 + TSS region transcription start site region 30370
Tssr30371 3 93444693 to 93444705 12 + TSS region transcription start site region 30371
Tssr34356 3 93444705 to 93444719 14 - TSS region transcription start site region 34356
Tssr30372 3 93444706 to 93444715 9 + TSS region transcription start site region 30372
Tssr34357 3 93444750 to 93444784 34 - TSS region transcription start site region 34357
Tssr30373 3 93444757 to 93444768 11 + TSS region transcription start site region 30373
Tssr30374 3 93444775 to 93444782 7 + TSS region transcription start site region 30374
Tssr30375 3 93444788 to 93444795 7 + TSS region transcription start site region 30375
Tssr34358 3 93444802 to 93444843 41 - TSS region transcription start site region 34358
Tssr30376 3 93444814 to 93444831 17 + TSS region transcription start site region 30376
Tssr30377 3 93444836 to 93444857 21 + TSS region transcription start site region 30377
Tssr30378 3 93444869 to 93444879 10 + TSS region transcription start site region 30378
Tssr34359 3 93444871 to 93444918 47 - TSS region transcription start site region 34359
Tssr30379 3 93444887 to 93444896 9 + TSS region transcription start site region 30379
Tssr34360 3 93444952 to 93444963 11 - TSS region transcription start site region 34360
Tssr30380 3 93444967 to 93444975 8 + TSS region transcription start site region 30380
Tssr34361 3 93444973 to 93445020 47 - TSS region transcription start site region 34361
Tssr30381 3 93444985 to 93444992 7 + TSS region transcription start site region 30381
Tssr34362 3 93445022 to 93445033 11 - TSS region transcription start site region 34362
Tssr30382 3 93445044 to 93445047 3 + TSS region transcription start site region 30382
Tssr34363 3 93445049 to 93445058 9 - TSS region transcription start site region 34363
Tssr30383 3 93445055 to 93445058 3 + TSS region transcription start site region 30383
Tssr30384 3 93445064 to 93445067 3 + TSS region transcription start site region 30384
Tssr34364 3 93445066 to 93445073 7 - TSS region transcription start site region 34364
Tssr30385 3 93445080 to 93445092 12 + TSS region transcription start site region 30385
Tssr34365 3 93445080 to 93445099 19 - TSS region transcription start site region 34365
Tssr30386 3 93445101 to 93445114 13 + TSS region transcription start site region 30386
Tssr962 3 93445123 to 93445126 3 + TSS region transcription start site region 962
Tssr34366 3 93445140 to 93445167 27 - TSS region transcription start site region 34366
Tssr963 3 93445160 to 93445162 2 + TSS region transcription start site region 963
Tssr30387 3 93445192 to 93445208 16 + TSS region transcription start site region 30387
Tssr30388 3 93445218 to 93445227 9 + TSS region transcription start site region 30388
Tssr30389 3 93445232 to 93445249 17 + TSS region transcription start site region 30389
Tssr964 3 93445256 to 93445261 5 + TSS region transcription start site region 964
Tssr34367 3 93445273 to 93445332 59 - TSS region transcription start site region 34367
Tssr30390 3 93445304 to 93445320 16 + TSS region transcription start site region 30390
Tssr30391 3 93445323 to 93445330 7 + TSS region transcription start site region 30391
Tssr30392 3 93445341 to 93445348 7 + TSS region transcription start site region 30392
Tssr34368 3 93445352 to 93445362 10 - TSS region transcription start site region 34368
Tssr30393 3 93445358 to 93445359 1 + TSS region transcription start site region 30393
Tssr34369 3 93445377 to 93445388 11 - TSS region transcription start site region 34369
Tssr30394 3 93445378 to 93445385 7 + TSS region transcription start site region 30394
Tssr34370 3 93445391 to 93445414 23 - TSS region transcription start site region 34370
Tssr30395 3 93445403 to 93445412 9 + TSS region transcription start site region 30395
Tssr34371 3 93445445 to 93445557 112 - TSS region transcription start site region 34371
Tssr30396 3 93445452 to 93445462 10 + TSS region transcription start site region 30396
Tssr30397 3 93445469 to 93445478 9 + TSS region transcription start site region 30397
Tssr30398 3 93445544 to 93445556 12 + TSS region transcription start site region 30398
Tssr30399 3 93445591 to 93445635 44 + TSS region transcription start site region 30399
Tssr30400 3 93446076 to 93446084 8 + TSS region transcription start site region 30400
Tssr30401 3 93446096 to 93446105 9 + TSS region transcription start site region 30401
Tssr30402 3 93446195 to 93446205 10 + TSS region transcription start site region 30402
Tssr34372 3 93446208 to 93446218 10 - TSS region transcription start site region 34372
Tssr30403 3 93446235 to 93446242 7 + TSS region transcription start site region 30403