Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:91696114-92297246

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35185 3 91738353 to 91740494 2141 - protein coding gene predicted gene, 35185
Gm46837 3 91914377 to 91916526 2149 + pseudogene predicted gene, 46837
Gm17742 3 91996114 to 91997246 1132 + pseudogene predicted gene, 17742
Gm23697 3 92010756 to 92010865 109 - miRNA gene predicted gene, 23697
Tssr30275 3 92012428 to 92012462 34 + TSS region transcription start site region 30275
Pglyrp3 3 92014583 to 92031582 16999 + protein coding gene peptidoglycan recognition protein 3
Cpgi13469 3 92024448 to 92024843 395 CpG island CpG island 13469
Tssr30276 3 92024481 to 92024524 43 + TSS region transcription start site region 30276
Tssr30277 3 92024528 to 92024539 11 + TSS region transcription start site region 30277
Tssr30278 3 92024546 to 92024561 15 + TSS region transcription start site region 30278
Mif-ps3 3 92024567 to 92024911 344 + pseudogene macrophage migration inhibitory factor, pseudogene 3
Gm25145 3 92061397 to 92061506 109 - miRNA gene predicted gene, 25145
Lor 3 92080271 to 92083142 2871 - protein coding gene loricrin
Tssr34265 3 92080301 to 92080347 46 - TSS region transcription start site region 34265
Tssr34266 3 92080385 to 92080412 27 - TSS region transcription start site region 34266
Cpgi13470 3 92080390 to 92082191 1801 CpG island CpG island 13470
Tssr34267 3 92080913 to 92080931 18 - TSS region transcription start site region 34267
Tssr34268 3 92081353 to 92081366 13 - TSS region transcription start site region 34268
Tssr34269 3 92081643 to 92081659 16 - TSS region transcription start site region 34269
Tssr34270 3 92083132 to 92083147 15 - TSS region transcription start site region 34270
Gm43736 3 92097351 to 92099631 2280 + lincRNA gene predicted gene 43736
4930511M18Rik 3 92102578 to 92142736 40158 - sense overlapping lncRNA gene RIKEN cDNA 4930511M18 gene
Tssr30279 3 92113186 to 92113199 13 + TSS region transcription start site region 30279
Gm43735 3 92113192 to 92119317 6125 + antisense lncRNA gene predicted gene 43735
Prr9 3 92122204 to 92123947 1743 - protein coding gene proline rich 9
Tssr34271 3 92123943 to 92123953 10 - TSS region transcription start site region 34271
Lelp1 3 92134997 to 92142744 7747 - protein coding gene late cornified envelope-like proline-rich 1
Tssr34272 3 92142738 to 92142766 28 - TSS region transcription start site region 34272
Tssr30280 3 92170212 to 92170222 10 + TSS region transcription start site region 30280
Gm35439 3 92170221 to 92177907 7686 + lincRNA gene predicted gene, 35439
Tssr30281 3 92194326 to 92194328 2 + TSS region transcription start site region 30281
Sprr2a1 3 92215799 to 92221911 6112 + protein coding gene small proline-rich protein 2A1
Gm5850 3 92227469 to 92228674 1205 - pseudogene predicted gene 5850
Gm37087 3 92242933 to 92246241 3308 - unclassified gene predicted gene, 37087
Sprr2a2 3 92250647 to 92257304 6657 + protein coding gene small proline-rich protein 2A2
Gm5851 3 92262271 to 92263474 1203 - pseudogene predicted gene 5851
Gm37752 3 92277725 to 92281033 3308 - unclassified gene predicted gene, 37752
Sprr2a3 3 92285304 to 92289264 3960 + protein coding gene small proline-rich protein 2A3