Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:90341388-90483622

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
hsh 3 87263147 to 90359778 3096631 heritable phenotypic marker hind shaker
Gatad2b 3 90293285 to 90363405 70120 + protein coding gene GATA zinc finger domain containing 2B
Tssr30194 3 90357988 to 90358011 23 + TSS region transcription start site region 30194
Tssr30195 3 90359338 to 90359352 14 + TSS region transcription start site region 30195
Tssr30196 3 90359492 to 90359508 16 + TSS region transcription start site region 30196
Tssr30197 3 90359591 to 90359610 19 + TSS region transcription start site region 30197
Tssr30198 3 90359626 to 90359639 13 + TSS region transcription start site region 30198
D3Mit232 3 90359629 to 90359778 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 232
Tssr30199 3 90363089 to 90363094 5 + TSS region transcription start site region 30199
Tssr30200 3 90363160 to 90363164 4 + TSS region transcription start site region 30200
Slc27a3 3 90385239 to 90389938 4699 - protein coding gene solute carrier family 27 (fatty acid transporter), member 3
Cpgi13459 3 90388737 to 90390342 1605 CpG island CpG island 13459
Tssr34206 3 90389281 to 90389319 38 - TSS region transcription start site region 34206
Tssr34207 3 90389849 to 90389862 13 - TSS region transcription start site region 34207
Tssr34208 3 90389884 to 90389924 40 - TSS region transcription start site region 34208
Tssr34209 3 90389936 to 90389958 22 - TSS region transcription start site region 34209
Tssr34210 3 90389963 to 90389976 13 - TSS region transcription start site region 34210
Ints3 3 90391388 to 90433622 42234 - protein coding gene integrator complex subunit 3
Tssr34211 3 90433014 to 90433025 11 - TSS region transcription start site region 34211
Cpgi13460 3 90433061 to 90434007 946 CpG island CpG island 13460
Tssr34212 3 90433464 to 90433499 35 - TSS region transcription start site region 34212
Tssr34213 3 90433523 to 90433534 11 - TSS region transcription start site region 34213
Tssr34214 3 90433553 to 90433565 12 - TSS region transcription start site region 34214
Tssr34215 3 90433582 to 90433600 18 - TSS region transcription start site region 34215
Tssr34216 3 90433603 to 90433619 16 - TSS region transcription start site region 34216
Tssr30201 3 90433791 to 90433820 29 + TSS region transcription start site region 30201
Npr1 3 90450591 to 90465866 15275 - protein coding gene natriuretic peptide receptor 1
Tssr30202 3 90450953 to 90450967 14 + TSS region transcription start site region 30202
Tssr34217 3 90451386 to 90451395 9 - TSS region transcription start site region 34217
Tssr34218 3 90451409 to 90451484 75 - TSS region transcription start site region 34218
Gm16048 3 90451583 to 90457095 5512 + antisense lncRNA gene predicted gene 16048
Cpgi13461 3 90455054 to 90455231 177 CpG island CpG island 13461
Tssr34219 3 90455089 to 90455112 23 - TSS region transcription start site region 34219
Cpgi13462 3 90464535 to 90466386 1851 CpG island CpG island 13462
Tssr34220 3 90464539 to 90464613 74 - TSS region transcription start site region 34220
Tssr34221 3 90464630 to 90464640 10 - TSS region transcription start site region 34221
Tssr34222 3 90464655 to 90464663 8 - TSS region transcription start site region 34222
Tssr34223 3 90464665 to 90464676 11 - TSS region transcription start site region 34223
Tssr30203 3 90464713 to 90464726 13 + TSS region transcription start site region 30203
Tssr34224 3 90465610 to 90465620 10 - TSS region transcription start site region 34224
Tssr34225 3 90465793 to 90465796 3 - TSS region transcription start site region 34225
Tssr34226 3 90465814 to 90465819 5 - TSS region transcription start site region 34226
Tssr34227 3 90465832 to 90465846 14 - TSS region transcription start site region 34227
Tssr34228 3 90465858 to 90465874 16 - TSS region transcription start site region 34228
Tssr30204 3 90466085 to 90466090 5 + TSS region transcription start site region 30204
Tssr34229 3 90466329 to 90466358 29 - TSS region transcription start site region 34229
Tssr34230 3 90466362 to 90466404 42 - TSS region transcription start site region 34230
Gm43595 3 90468898 to 90470959 2061 - pseudogene predicted gene 43595
Cpgi13463 3 90475845 to 90476543 698 CpG island CpG island 13463
n-TMcat11 3 90475860 to 90475931 71 - tRNA gene nuclear encoded tRNA methionine 11 (anticodon CAT)
Tssr30205 3 90476121 to 90476220 99 + TSS region transcription start site region 30205
Ilf2 3 90476201 to 90488379 12178 + protein coding gene interleukin enhancer binding factor 2