Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:89831466-89951478

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13444 3 89830669 to 89832127 1458 CpG island CpG island 13444
She 3 89831370 to 89858834 27464 + protein coding gene src homology 2 domain-containing transforming protein E
D3Mit341 3 89838121 to 89838245 124 DNA segment DNA Segment, Chr 3 Massachusetts Institute of Technology 341
Tssr30142 3 89864395 to 89864411 16 + TSS region transcription start site region 30142
Il6ra 3 89869324 to 89913196 43872 - protein coding gene interleukin 6 receptor, alpha
Tssr34154 3 89870177 to 89870194 17 - TSS region transcription start site region 34154
Tssr34155 3 89870201 to 89870211 10 - TSS region transcription start site region 34155
Tssr34156 3 89870217 to 89870226 9 - TSS region transcription start site region 34156
Tssr34157 3 89870228 to 89870244 16 - TSS region transcription start site region 34157
Tssr34158 3 89871053 to 89871067 14 - TSS region transcription start site region 34158
Tssr34159 3 89871745 to 89871752 7 - TSS region transcription start site region 34159
Gm46811 3 89872076 to 89890235 18159 + lncRNA gene predicted gene, 46811
Tssr34160 3 89891466 to 89891478 12 - TSS region transcription start site region 34160
Tssr34161 3 89904373 to 89904382 9 - TSS region transcription start site region 34161
Tssr34162 3 89904395 to 89904410 15 - TSS region transcription start site region 34162
Tssr34163 3 89904416 to 89904427 11 - TSS region transcription start site region 34163
Tssr34164 3 89904507 to 89904518 11 - TSS region transcription start site region 34164
Tssr30143 3 89911393 to 89911406 13 + TSS region transcription start site region 30143
Cpgi13445 3 89912618 to 89913519 901 CpG island CpG island 13445
Tssr30144 3 89912892 to 89912898 6 + TSS region transcription start site region 30144
Gm42809 3 89912916 to 89914053 1137 + antisense lncRNA gene predicted gene 42809
Tssr34165 3 89913102 to 89913111 9 - TSS region transcription start site region 34165
Tssr34166 3 89913144 to 89913172 28 - TSS region transcription start site region 34166
Tssr34167 3 89913186 to 89913202 16 - TSS region transcription start site region 34167
Atp8b2 3 89939481 to 89963332 23851 - protein coding gene ATPase, class I, type 8B, member 2