Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:89421736-89451761

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shc1 3 89418443 to 89430027 11584 + protein coding gene src homology 2 domain-containing transforming protein C1
Tssr30109 3 89423385 to 89423397 12 + TSS region transcription start site region 30109
Tssr30110 3 89429589 to 89429612 23 + TSS region transcription start site region 30110
Cpgi13432 3 89430026 to 89430913 887 CpG island CpG island 13432
Pygo2 3 89430214 to 89435128 4914 + protein coding gene pygopus 2
Tssr30111 3 89430273 to 89430289 16 + TSS region transcription start site region 30111
Tssr30112 3 89430395 to 89430500 105 + TSS region transcription start site region 30112
Tssr30113 3 89430536 to 89430543 7 + TSS region transcription start site region 30113
Tssr30114 3 89430581 to 89430597 16 + TSS region transcription start site region 30114
Tssr34141 3 89430742 to 89430752 10 - TSS region transcription start site region 34141
Tssr30115 3 89432470 to 89432495 25 + TSS region transcription start site region 30115
Tssr30116 3 89432899 to 89432933 34 + TSS region transcription start site region 30116
Tssr30117 3 89436699 to 89436734 35 + TSS region transcription start site region 30117
Pbxip1 3 89436706 to 89450952 14246 + protein coding gene pre B cell leukemia transcription factor interacting protein 1
Tssr30118 3 89436736 to 89436761 25 + TSS region transcription start site region 30118
Tssr30119 3 89436879 to 89436892 13 + TSS region transcription start site region 30119
Tssr942 3 89437531 to 89437573 42 + TSS region transcription start site region 942
Tssr30120 3 89450385 to 89450404 19 + TSS region transcription start site region 30120