MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:89226784-89236798

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cia5a	3	87263147 to 89232787	1969640		QTL	collagen induced arthritis QTL 5a
Thbs3	3	89215180 to 89226837	11657	+	protein coding gene	thrombospondin 3
Cpgi13411	3	89227007 to 89227781	774		CpG island	CpG island 13411
Mir92b	3	89227116 to 89227198	82	-	miRNA gene	microRNA 92b
Tssr34099	3	89227385 to 89227388	3	-	TSS region	transcription start site region 34099
Cpgi13412	3	89228141 to 89228422	281		CpG island	CpG island 13412
Tssr30075	3	89229046 to 89229066	20	+	TSS region	transcription start site region 30075
Muc1	3	89229057 to 89233381	4324	+	protein coding gene	mucin 1, transmembrane
Tssr30076	3	89230309 to 89230326	17	+	TSS region	transcription start site region 30076
Tssr30077	3	89230825 to 89230878	53	+	TSS region	transcription start site region 30077
Tssr30078	3	89231483 to 89231496	13	+	TSS region	transcription start site region 30078
Tssr30079	3	89231784 to 89231798	14	+	TSS region	transcription start site region 30079
Tssr30080	3	89231816 to 89231826	10	+	TSS region	transcription start site region 30080
Lmr11c	3	89232660 to 89232787	127		QTL	leishmaniasis resistance 11c
D3Mit49	3	89232660 to 89232787	127		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 49
Lmr11	3	89232660 to 89232787	127		QTL	leishmaniasis resistance 11
D3Dcr14	3	89232671 to 89232778	107		DNA segment	DNA Segment, Chr 3, Derry C. Roopenian 14
Trim46	3	89234169 to 89246154	11985	-	protein coding gene	tripartite motif-containing 46
Ctrq2	3	137747247 to 89232660	-48514587		QTL	C. trachomatis resistance QTL 2