Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:89088588-89106959

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43738 3 89081939 to 89101099 19160 - protein coding gene predicted gene 43738
Rusc1 3 89083981 to 89093311 9330 - protein coding gene RUN and SH3 domain containing 1
Tssr30034 3 89088768 to 89088804 36 + TSS region transcription start site region 30034
Cpgi13396 3 89089628 to 89091720 2092 CpG island CpG island 13396
Tssr34080 3 89089660 to 89089669 9 - TSS region transcription start site region 34080
Tssr34081 3 89089699 to 89089716 17 - TSS region transcription start site region 34081
Tssr34082 3 89089748 to 89089759 11 - TSS region transcription start site region 34082
Tssr34083 3 89089854 to 89089870 16 - TSS region transcription start site region 34083
Tssr34084 3 89089955 to 89090008 53 - TSS region transcription start site region 34084
Tssr34085 3 89091530 to 89091570 40 - TSS region transcription start site region 34085
Cpgi13397 3 89093055 to 89093524 469 CpG island CpG island 13397
Tssr34086 3 89093285 to 89093356 71 - TSS region transcription start site region 34086
Tssr34087 3 89093358 to 89093367 9 - TSS region transcription start site region 34087
Tssr34088 3 89093369 to 89093372 3 - TSS region transcription start site region 34088
Fdps 3 89093588 to 89101959 8371 - protein coding gene farnesyl diphosphate synthetase
Tssr34089 3 89094856 to 89094860 4 - TSS region transcription start site region 34089
Gm22935 3 89097910 to 89098013 103 - snRNA gene predicted gene, 22935
Cpgi13398 3 89101497 to 89102249 752 CpG island CpG island 13398
Tssr34090 3 89101858 to 89101898 40 - TSS region transcription start site region 34090
Tssr34091 3 89101907 to 89101969 62 - TSS region transcription start site region 34091
Tssr34092 3 89102017 to 89102020 3 - TSS region transcription start site region 34092