Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:88944012-89084133

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dap3 3 88920803 to 88951181 30378 - protein coding gene death associated protein 3
Cpgi13394 3 88949544 to 88951271 1727 CpG island CpG island 13394
Tssr34071 3 88949937 to 88949989 52 - TSS region transcription start site region 34071
Tssr30023 3 88950031 to 88950082 51 + TSS region transcription start site region 30023
Tssr34072 3 88950153 to 88950190 37 - TSS region transcription start site region 34072
Tssr34073 3 88950192 to 88950221 29 - TSS region transcription start site region 34073
Tssr34074 3 88950281 to 88950321 40 - TSS region transcription start site region 34074
Tssr30024 3 88950350 to 88950395 45 + TSS region transcription start site region 30024
Tssr34075 3 88950401 to 88950432 31 - TSS region transcription start site region 34075
Tssr30025 3 88950429 to 88950446 17 + TSS region transcription start site region 30025
Tssr34076 3 88950476 to 88950584 108 - TSS region transcription start site region 34076
Ash1l 3 88950622 to 89079375 128753 + protein coding gene ASH1 like histone lysine methyltransferase
Tssr30026 3 88950638 to 88950668 30 + TSS region transcription start site region 30026
Tssr30027 3 88950671 to 88950692 21 + TSS region transcription start site region 30027
Tssr30028 3 88950701 to 88950749 48 + TSS region transcription start site region 30028
Tssr30029 3 88950788 to 88950852 64 + TSS region transcription start site region 30029
Tssr30030 3 88950859 to 88950872 13 + TSS region transcription start site region 30030
Tssr34077 3 88951090 to 88951115 25 - TSS region transcription start site region 34077
Tssr34078 3 88951119 to 88951133 14 - TSS region transcription start site region 34078
Tssr34079 3 88951146 to 88951213 67 - TSS region transcription start site region 34079
Gm26465 3 88970623 to 88970729 106 - snRNA gene predicted gene, 26465
Tssr30031 3 88970717 to 88970721 4 + TSS region transcription start site region 30031
Tssr30032 3 88984876 to 88984918 42 + TSS region transcription start site region 30032
D3Mit282 3 89014012 to 89014133 121 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 282
Tssr30033 3 89043241 to 89043278 37 + TSS region transcription start site region 30033
Gm24403 3 89048998 to 89049127 129 - snoRNA gene predicted gene, 24403
Gm43738 3 89081939 to 89101099 19160 - protein coding gene predicted gene 43738
Rusc1 3 89083981 to 89093311 9330 - protein coding gene RUN and SH3 domain containing 1