Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:88314738-88356177

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cct3 3 88297135 to 88321766 24631 + protein coding gene chaperonin containing Tcp1, subunit 3 (gamma)
Glmp 3 88325023 to 88328631 3608 + protein coding gene glycosylated lysosomal membrane protein
Tssr29938 3 88325030 to 88325075 45 + TSS region transcription start site region 29938
Tssr29939 3 88325078 to 88325080 2 + TSS region transcription start site region 29939
Tssr29940 3 88326162 to 88326180 18 + TSS region transcription start site region 29940
Tssr29941 3 88326413 to 88326444 31 + TSS region transcription start site region 29941
Tmem79 3 88328653 to 88334433 5780 - protein coding gene transmembrane protein 79
Cpgi13370 3 88332503 to 88333408 905 CpG island CpG island 13370
Tssr34001 3 88334428 to 88334466 38 - TSS region transcription start site region 34001
Tssr34002 3 88334482 to 88334495 13 - TSS region transcription start site region 34002
BC038331 3 88334738 to 88336177 1439 unclassified gene cDNA sequence BC038331
D3Mit175 3 88334866 to 88335000 134 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 175
Cpgi13371 3 88335828 to 88336877 1049 CpG island CpG island 13371
Tssr34003 3 88336165 to 88336198 33 - TSS region transcription start site region 34003
Tssr29942 3 88336256 to 88336304 48 + TSS region transcription start site region 29942
Smg5 3 88336260 to 88362337 26077 + protein coding gene Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)
Tssr34004 3 88336498 to 88336526 28 - TSS region transcription start site region 34004
Tssr29943 3 88337843 to 88337853 10 + TSS region transcription start site region 29943
Tssr29944 3 88340277 to 88340281 4 + TSS region transcription start site region 29944
Tssr29945 3 88351097 to 88351112 15 + TSS region transcription start site region 29945
Cpgi13372 3 88352960 to 88353140 180 CpG island CpG island 13372