Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:88209706-88299722

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm3764 3 88206813 to 88229959 23146 + lincRNA gene predicted gene 3764
Tssr29925 3 88212739 to 88212771 32 + TSS region transcription start site region 29925
Cpgi13365 3 88214387 to 88216175 1788 CpG island CpG island 13365
Tssr29926 3 88214474 to 88214491 17 + TSS region transcription start site region 29926
Mir3093 3 88215171 to 88215257 86 + miRNA gene microRNA 3093
Gm25641 3 88215589 to 88215696 107 - miRNA gene predicted gene, 25641
Mir9-1 3 88215598 to 88215686 88 + miRNA gene microRNA 9-1
Tssr29927 3 88215672 to 88215680 8 + TSS region transcription start site region 29927
Tssr29928 3 88218241 to 88218246 5 + TSS region transcription start site region 29928
4931402H11Rik 3 88227410 to 88232335 4925 unclassified non-coding RNA gene RIKEN cDNA 4931402H11 gene
Tssr29929 3 88227434 to 88227438 4 + TSS region transcription start site region 29929
Tssr29930 3 88228329 to 88228340 11 + TSS region transcription start site region 29930
Cpgi13366 3 88240735 to 88241875 1140 CpG island CpG island 13366
Rhbg 3 88242874 to 88254709 11835 - protein coding gene Rhesus blood group-associated B glycoprotein
Gm38392 3 88243380 to 88287210 43830 - protein coding gene predicted gene, 38392
Cpgi13367 3 88245854 to 88246065 211 CpG island CpG island 13367
Cpgi13368 3 88254322 to 88254898 576 CpG island CpG island 13368
Tssr33992 3 88254675 to 88254689 14 - TSS region transcription start site region 33992
Tssr33993 3 88254706 to 88254722 16 - TSS region transcription start site region 33993
Tssr33994 3 88276901 to 88276921 20 - TSS region transcription start site region 33994
Tssr29931 3 88277063 to 88277081 18 + TSS region transcription start site region 29931
Tssr29932 3 88278448 to 88278459 11 + TSS region transcription start site region 29932
Tssr33995 3 88281270 to 88281286 16 - TSS region transcription start site region 33995
Tssr931 3 88282037 to 88282044 7 + TSS region transcription start site region 931
Tsacc 3 88282757 to 88296999 14242 - protein coding gene TSSK6 activating co-chaperone
Gm37116 3 88284607 to 88284753 146 - pseudogene predicted gene, 37116
Tssr33996 3 88296398 to 88296410 12 - TSS region transcription start site region 33996
Cpgi13369 3 88296586 to 88297824 1238 CpG island CpG island 13369
Tssr33997 3 88296590 to 88296610 20 - TSS region transcription start site region 33997
Tssr29933 3 88296643 to 88296672 29 + TSS region transcription start site region 29933
Tssr33998 3 88296850 to 88296909 59 - TSS region transcription start site region 33998
Tssr33999 3 88296925 to 88296939 14 - TSS region transcription start site region 33999
Tssr34000 3 88296979 to 88296988 9 - TSS region transcription start site region 34000
Tssr29934 3 88296981 to 88296992 11 + TSS region transcription start site region 29934
Tssr29935 3 88297115 to 88297144 29 + TSS region transcription start site region 29935
Cct3 3 88297135 to 88321766 24631 + protein coding gene chaperonin containing Tcp1, subunit 3 (gamma)
Tssr29936 3 88297147 to 88297193 46 + TSS region transcription start site region 29936
Tssr29937 3 88297196 to 88297218 22 + TSS region transcription start site region 29937