Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 3:88093209-88193229

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35 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Iqgap3 3 88082002 to 88121048 39046 + protein coding gene IQ motif containing GTPase activating protein 3
Tssr29895 3 88138789 to 88138805 16 + TSS region transcription start site region 29895
Cpgi13360 3 88138870 to 88139433 563 CpG island CpG island 13360
Tssr29896 3 88138891 to 88138904 13 + TSS region transcription start site region 29896
Tssr33984 3 88139433 to 88139467 34 - TSS region transcription start site region 33984
Tssr33985 3 88139929 to 88139945 16 - TSS region transcription start site region 33985
Tssr29897 3 88140837 to 88140855 18 + TSS region transcription start site region 29897
Tssr29898 3 88141160 to 88141164 4 + TSS region transcription start site region 29898
Tssr33986 3 88141626 to 88141639 13 - TSS region transcription start site region 33986
Tssr29899 3 88141767 to 88141771 4 + TSS region transcription start site region 29899
Cpgi13361 3 88141879 to 88143560 1681 CpG island CpG island 13361
Tssr29900 3 88141973 to 88142024 51 + TSS region transcription start site region 29900
Tssr33987 3 88142174 to 88142194 20 - TSS region transcription start site region 33987
Tssr29901 3 88142328 to 88142483 155 + TSS region transcription start site region 29901
Mef2d 3 88142372 to 88172086 29714 + protein coding gene myocyte enhancer factor 2D
Tssr29902 3 88142536 to 88142545 9 + TSS region transcription start site region 29902
Tssr29903 3 88142547 to 88142585 38 + TSS region transcription start site region 29903
Tssr29904 3 88142702 to 88142745 43 + TSS region transcription start site region 29904
Tssr29905 3 88142802 to 88142822 20 + TSS region transcription start site region 29905
Tssr33988 3 88143209 to 88143229 20 - TSS region transcription start site region 33988
Tssr29906 3 88143349 to 88143448 99 + TSS region transcription start site region 29906
Tssr33989 3 88143620 to 88143631 11 - TSS region transcription start site region 33989
Tssr29907 3 88144332 to 88144340 8 + TSS region transcription start site region 29907
Tssr29908 3 88145582 to 88145600 18 + TSS region transcription start site region 29908
Tssr29909 3 88158079 to 88158094 15 + TSS region transcription start site region 29909
Tssr29910 3 88159724 to 88159731 7 + TSS region transcription start site region 29910
Tssr33990 3 88161304 to 88161324 20 - TSS region transcription start site region 33990
Tssr29911 3 88163043 to 88163053 10 + TSS region transcription start site region 29911
Tssr29912 3 88167572 to 88167588 16 + TSS region transcription start site region 29912
Tssr29913 3 88167594 to 88167654 60 + TSS region transcription start site region 29913
Tssr29914 3 88170324 to 88170336 12 + TSS region transcription start site region 29914
1700113A16Rik 3 88171560 to 88177785 6225 - lncRNA gene RIKEN cDNA 1700113A16 gene
Cpgi13362 3 88177544 to 88178371 827 CpG island CpG island 13362
Tssr33991 3 88177671 to 88177783 112 - TSS region transcription start site region 33991
D3Mit74 3 88187246 to 88187394 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 74