MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:8807238-8957570

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mrps28	3	8802146 to 8923857	121711	-	protein coding gene	mitochondrial ribosomal protein S28
Tssr32558	3	8829696 to 8829707	11	-	TSS region	transcription start site region 32558
Tssr32559	3	8829714 to 8829731	17	-	TSS region	transcription start site region 32559
Tssr32560	3	8863270 to 8863302	32	-	TSS region	transcription start site region 32560
Gm41995	3	8866119 to 8881665	15546	+	lncRNA gene	predicted gene, 41995
Tssr28336	3	8881143 to 8881152	9	+	TSS region	transcription start site region 28336
Gm15467	3	8881199 to 8881643	444	+	pseudogene	predicted gene 15467
Gm15466	3	8882238 to 8882570	332	-	pseudogene	predicted gene 15466
Tssr32561	3	8882741 to 8882744	3	-	TSS region	transcription start site region 32561
Tssr32562	3	8913985 to 8913990	5	-	TSS region	transcription start site region 32562
Cpgi12967	3	8923182 to 8924095	913		CpG island	CpG island 12967
Tssr28337	3	8923550 to 8923569	19	+	TSS region	transcription start site region 28337
Tssr32563	3	8923796 to 8923822	26	-	TSS region	transcription start site region 32563
Tssr28338	3	8923897 to 8923912	15	+	TSS region	transcription start site region 28338
9130403I23Rik	3	8925589 to 8928268	2679		unclassified gene	RIKEN cDNA 9130403I23 gene
Tpd52	3	8929431 to 9004771	75340	-	protein coding gene	tumor protein D52
Tssr32564	3	8936370 to 8936374	4	-	TSS region	transcription start site region 32564
Tssr32565	3	8937981 to 8937985	4	-	TSS region	transcription start site region 32565