Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 3:87928693-87973372

Filter by:
24 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rrnad1 3 87922601 to 87930717 8116 - protein coding gene ribosomal RNA adenine dimethylase domain containing 1
Cpgi13347 3 87929822 to 87930910 1088 CpG island CpG island 13347
Tssr33964 3 87930121 to 87930182 61 - TSS region transcription start site region 33964
Tssr29869 3 87930204 to 87930234 30 + TSS region transcription start site region 29869
Tssr29870 3 87930256 to 87930350 94 + TSS region transcription start site region 29870
Isg20l2 3 87930314 to 87940686 10372 + protein coding gene interferon stimulated exonuclease gene 20-like 2
Tssr29871 3 87930437 to 87930449 12 + TSS region transcription start site region 29871
Tssr29872 3 87930516 to 87930600 84 + TSS region transcription start site region 29872
Tssr29873 3 87932165 to 87932184 19 + TSS region transcription start site region 29873
Cpgi13348 3 87948330 to 87948742 412 CpG island CpG island 13348
Tssr29874 3 87948687 to 87948704 17 + TSS region transcription start site region 29874
Crabp2 3 87948693 to 87953372 4679 + protein coding gene cellular retinoic acid binding protein II
Tssr29875 3 87952532 to 87952555 23 + TSS region transcription start site region 29875
Tssr29876 3 87953046 to 87953056 10 + TSS region transcription start site region 29876
Tssr29877 3 87953062 to 87953071 9 + TSS region transcription start site region 29877
Tssr29878 3 87953085 to 87953097 12 + TSS region transcription start site region 29878
Gm32518 3 87960240 to 87965726 5486 + lncRNA gene predicted gene, 32518
Cpgi13349 3 87960933 to 87961147 214 CpG island CpG island 13349
Gm3745 3 87968186 to 87968606 420 + pseudogene predicted gene 3745
Cpgi13350 3 87970793 to 87972323 1530 CpG island CpG island 13350
Tssr29879 3 87971071 to 87971089 18 + TSS region transcription start site region 29879
Nes 3 87971093 to 87980451 9358 + protein coding gene nestin
Tssr930 3 87971145 to 87971150 5 + TSS region transcription start site region 930
Tssr29880 3 87971154 to 87971165 11 + TSS region transcription start site region 29880