Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:87923046-87983056

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mrpl24	3	87919506 to 87923672	4166	+	protein coding gene	mitochondrial ribosomal protein L24
Rrnad1	3	87922601 to 87930582	7981	-	protein coding gene	ribosomal RNA adenine dimethylase domain containing 1
Cpgi13347	3	87929822 to 87930910	1088		CpG island	CpG island 13347
Tssr33964	3	87930121 to 87930182	61	-	TSS region	transcription start site region 33964
Tssr29869	3	87930204 to 87930234	30	+	TSS region	transcription start site region 29869
Tssr29870	3	87930256 to 87930350	94	+	TSS region	transcription start site region 29870
Isg20l2	3	87930314 to 87940686	10372	+	protein coding gene	interferon stimulated exonuclease gene 20-like 2
Tssr29871	3	87930437 to 87930449	12	+	TSS region	transcription start site region 29871
Tssr29872	3	87930516 to 87930600	84	+	TSS region	transcription start site region 29872
Tssr29873	3	87932165 to 87932184	19	+	TSS region	transcription start site region 29873
Cpgi13348	3	87948330 to 87948742	412		CpG island	CpG island 13348
Tssr29874	3	87948687 to 87948704	17	+	TSS region	transcription start site region 29874
Crabp2	3	87948693 to 87953372	4679	+	protein coding gene	cellular retinoic acid binding protein II
Tssr29875	3	87952532 to 87952555	23	+	TSS region	transcription start site region 29875
Tssr29876	3	87953046 to 87953056	10	+	TSS region	transcription start site region 29876
Tssr29877	3	87953062 to 87953071	9	+	TSS region	transcription start site region 29877
Tssr29878	3	87953085 to 87953097	12	+	TSS region	transcription start site region 29878
Gm32518	3	87960084 to 87965726	5642	+	lncRNA gene	predicted gene, 32518
Cpgi13349	3	87960933 to 87961147	214		CpG island	CpG island 13349
Gm3745	3	87968186 to 87968606	420	+	pseudogene	predicted gene 3745
Cpgi13350	3	87970793 to 87972323	1530		CpG island	CpG island 13350
Tssr29879	3	87971071 to 87971089	18	+	TSS region	transcription start site region 29879
Nes	3	87971093 to 87980451	9358	+	protein coding gene	nestin
Tssr930	3	87971145 to 87971150	5	+	TSS region	transcription start site region 930
Tssr29880	3	87971154 to 87971165	11	+	TSS region	transcription start site region 29880
Tssr29881	3	87975767 to 87975796	29	+	TSS region	transcription start site region 29881
Tssr29882	3	87975947 to 87975962	15	+	TSS region	transcription start site region 29882
Tssr29883	3	87976023 to 87976045	22	+	TSS region	transcription start site region 29883
Tssr29884	3	87976108 to 87976119	11	+	TSS region	transcription start site region 29884
Tssr29885	3	87976220 to 87976246	26	+	TSS region	transcription start site region 29885
Tssr29886	3	87977209 to 87977213	4	+	TSS region	transcription start site region 29886