Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:87855558-87915608

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sh2d2a 3 87846755 to 87855722 8967 + protein coding gene SH2 domain containing 2A
Tssr29840 3 87857971 to 87857978 7 + TSS region transcription start site region 29840
Tssr29841 3 87858003 to 87858014 11 + TSS region transcription start site region 29841
Prcc 3 87858903 to 87885562 26659 - protein coding gene papillary renal cell carcinoma (translocation-associated)
Tssr33962 3 87870113 to 87870140 27 - TSS region transcription start site region 33962
Cpgi13344 3 87884755 to 87885923 1168 CpG island CpG island 13344
Tssr33963 3 87885558 to 87885608 50 - TSS region transcription start site region 33963
Cpgi13345 3 87905911 to 87907541 1630 CpG island CpG island 13345
Tssr927 3 87906070 to 87906091 21 + TSS region transcription start site region 927
Tssr928 3 87906127 to 87906145 18 + TSS region transcription start site region 928
Tssr929 3 87906157 to 87906170 13 + TSS region transcription start site region 929
Tssr29842 3 87906317 to 87906326 9 + TSS region transcription start site region 29842
Hdgf 3 87906321 to 87916132 9811 + protein coding gene heparin binding growth factor
Tssr29843 3 87906333 to 87906356 23 + TSS region transcription start site region 29843
Tssr29844 3 87906362 to 87906414 52 + TSS region transcription start site region 29844
Tssr29845 3 87906530 to 87906607 77 + TSS region transcription start site region 29845
Tssr29846 3 87906608 to 87906637 29 + TSS region transcription start site region 29846
Tssr29847 3 87906842 to 87906856 14 + TSS region transcription start site region 29847
Tssr29848 3 87906891 to 87906909 18 + TSS region transcription start site region 29848
Tssr29849 3 87906913 to 87906933 20 + TSS region transcription start site region 29849
Tssr29850 3 87914918 to 87914945 27 + TSS region transcription start site region 29850
Tssr29851 3 87915056 to 87915080 24 + TSS region transcription start site region 29851
Tssr29852 3 87915081 to 87915095 14 + TSS region transcription start site region 29852
Tssr29853 3 87915161 to 87915183 22 + TSS region transcription start site region 29853
Tssr29854 3 87915276 to 87915327 51 + TSS region transcription start site region 29854
Tssr29855 3 87915484 to 87915512 28 + TSS region transcription start site region 29855
Tssr29856 3 87915537 to 87915548 11 + TSS region transcription start site region 29856
Tssr29857 3 87915560 to 87915572 12 + TSS region transcription start site region 29857
Tssr29858 3 87915578 to 87915603 25 + TSS region transcription start site region 29858