Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:87754052-87854546

35 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pear1	3	87749097 to 87769110	20013	-	protein coding gene	platelet endothelial aggregation receptor 1
Cpgi13335	3	87755863 to 87756852	989		CpG island	CpG island 13335
Cpgi13336	3	87768777 to 87769195	418		CpG island	CpG island 13336
Tssr33952	3	87768932 to 87768960	28	-	TSS region	transcription start site region 33952
Tssr33953	3	87768967 to 87768975	8	-	TSS region	transcription start site region 33953
Tssr33954	3	87769059 to 87769068	9	-	TSS region	transcription start site region 33954
Ntrk1	3	87778244 to 87795162	16918	-	protein coding gene	neurotrophic tyrosine kinase, receptor, type 1
Cpgi13337	3	87778417 to 87778722	305		CpG island	CpG island 13337
Tssr33955	3	87783289 to 87783311	22	-	TSS region	transcription start site region 33955
Cpgi13338	3	87783664 to 87783970	306		CpG island	CpG island 13338
Cpgi13339	3	87794463 to 87796130	1667		CpG island	CpG island 13339
Tssr33956	3	87795206 to 87795222	16	-	TSS region	transcription start site region 33956
Cpgi13340	3	87796811 to 87797046	235		CpG island	CpG island 13340
Tssr29830	3	87796889 to 87796894	5	+	TSS region	transcription start site region 29830
Tssr29831	3	87796938 to 87796982	44	+	TSS region	transcription start site region 29831
Insrr	3	87796951 to 87816101	19150	+	protein coding gene	insulin receptor-related receptor
Cpgi13341	3	87800561 to 87800819	258		CpG island	CpG island 13341
Cpgi13342	3	87804052 to 87804546	494		CpG island	CpG island 13342
Cpgi13343	3	87809259 to 87810308	1049		CpG island	CpG island 13343
Gm40086	3	87820538 to 87823074	2536	+	lncRNA gene	predicted gene, 40086
Gm32470	3	87824755 to 87831268	6513	+	lncRNA gene	predicted gene, 32470
Tssr33957	3	87832312 to 87832319	7	-	TSS region	transcription start site region 33957
Tssr29832	3	87845295 to 87845299	4	+	TSS region	transcription start site region 29832
Tssr33958	3	87846589 to 87846601	12	-	TSS region	transcription start site region 33958
Tssr29833	3	87846725 to 87846772	47	+	TSS region	transcription start site region 29833
Sh2d2a	3	87846755 to 87855722	8967	+	protein coding gene	SH2 domain containing 2A
Tssr29834	3	87846778 to 87846788	10	+	TSS region	transcription start site region 29834
Tssr33959	3	87846787 to 87846801	14	-	TSS region	transcription start site region 33959
Tssr29835	3	87846840 to 87846854	14	+	TSS region	transcription start site region 29835
Tssr29836	3	87846881 to 87846893	12	+	TSS region	transcription start site region 29836
Tssr33960	3	87846884 to 87846905	21	-	TSS region	transcription start site region 33960
Tssr29837	3	87846988 to 87846999	11	+	TSS region	transcription start site region 29837
Tssr29838	3	87847004 to 87847067	63	+	TSS region	transcription start site region 29838
Tssr29839	3	87847136 to 87847147	11	+	TSS region	transcription start site region 29839
Tssr33961	3	87849105 to 87849126	21	-	TSS region	transcription start site region 33961