Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:87699097-87819110

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Arhgef11	3	87617559 to 87738034	120475	+	protein coding gene	Rho guanine nucleotide exchange factor (GEF) 11
Lrrc71	3	87736923 to 87748623	11700	-	protein coding gene	leucine rich repeat containing 71
Cpgi13334	3	87742593 to 87743065	472		CpG island	CpG island 13334
Tssr33945	3	87744267 to 87744269	2	-	TSS region	transcription start site region 33945
Tssr33946	3	87748533 to 87748555	22	-	TSS region	transcription start site region 33946
Tssr33947	3	87748556 to 87748568	12	-	TSS region	transcription start site region 33947
Tssr33948	3	87748577 to 87748598	21	-	TSS region	transcription start site region 33948
Tssr33949	3	87748599 to 87748615	16	-	TSS region	transcription start site region 33949
Tssr33950	3	87748619 to 87748630	11	-	TSS region	transcription start site region 33950
Pear1	3	87749097 to 87769110	20013	-	protein coding gene	platelet endothelial aggregation receptor 1
Tssr33951	3	87753257 to 87753259	2	-	TSS region	transcription start site region 33951
Cpgi13335	3	87755863 to 87756852	989		CpG island	CpG island 13335
Cpgi13336	3	87768777 to 87769195	418		CpG island	CpG island 13336
Tssr33952	3	87768932 to 87768960	28	-	TSS region	transcription start site region 33952
Tssr33953	3	87768967 to 87768975	8	-	TSS region	transcription start site region 33953
Tssr33954	3	87769059 to 87769068	9	-	TSS region	transcription start site region 33954
Ntrk1	3	87778244 to 87795162	16918	-	protein coding gene	neurotrophic tyrosine kinase, receptor, type 1
Cpgi13337	3	87778417 to 87778722	305		CpG island	CpG island 13337
Tssr33955	3	87783289 to 87783311	22	-	TSS region	transcription start site region 33955
Cpgi13338	3	87783664 to 87783970	306		CpG island	CpG island 13338
Cpgi13339	3	87794463 to 87796130	1667		CpG island	CpG island 13339
Tssr33956	3	87795206 to 87795222	16	-	TSS region	transcription start site region 33956
Cpgi13340	3	87796811 to 87797046	235		CpG island	CpG island 13340
Tssr29830	3	87796889 to 87796894	5	+	TSS region	transcription start site region 29830
Tssr29831	3	87796938 to 87796982	44	+	TSS region	transcription start site region 29831
Insrr	3	87796951 to 87816101	19150	+	protein coding gene	insulin receptor-related receptor
Cpgi13341	3	87800561 to 87800819	258		CpG island	CpG island 13341
Cpgi13342	3	87804052 to 87804546	494		CpG island	CpG island 13342
Cpgi13343	3	87809259 to 87810308	1049		CpG island	CpG island 13343