Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:87584633-87784644

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13333 3 87617076 to 87617897 821 CpG island CpG island 13333
Gm24109 3 87617399 to 87617501 102 + miRNA gene predicted gene, 24109
Tssr29826 3 87617541 to 87617613 72 + TSS region transcription start site region 29826
Arhgef11 3 87617559 to 87738034 120475 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 11
Tssr29827 3 87620917 to 87620922 5 + TSS region transcription start site region 29827
Tssr29828 3 87629487 to 87629496 9 + TSS region transcription start site region 29828
Gm19242 3 87648428 to 87648673 245 - pseudogene predicted gene, 19242
Tssr29829 3 87650960 to 87650963 3 + TSS region transcription start site region 29829
Gm6570 3 87679643 to 87680025 382 - protein coding gene predicted gene 6570
Tssr33944 3 87684633 to 87684644 11 - TSS region transcription start site region 33944
Lrrc71 3 87736923 to 87748623 11700 - protein coding gene leucine rich repeat containing 71
Cpgi13334 3 87742593 to 87743065 472 CpG island CpG island 13334
Tssr33945 3 87744267 to 87744269 2 - TSS region transcription start site region 33945
Tssr33946 3 87748533 to 87748555 22 - TSS region transcription start site region 33946
Tssr33947 3 87748556 to 87748568 12 - TSS region transcription start site region 33947
Tssr33948 3 87748577 to 87748598 21 - TSS region transcription start site region 33948
Tssr33949 3 87748599 to 87748615 16 - TSS region transcription start site region 33949
Tssr33950 3 87748619 to 87748630 11 - TSS region transcription start site region 33950
Pear1 3 87749097 to 87769110 20013 - protein coding gene platelet endothelial aggregation receptor 1
Tssr33951 3 87753257 to 87753259 2 - TSS region transcription start site region 33951
Cpgi13335 3 87755863 to 87756852 989 CpG island CpG island 13335
Cpgi13336 3 87768777 to 87769195 418 CpG island CpG island 13336
Tssr33952 3 87768932 to 87768960 28 - TSS region transcription start site region 33952
Tssr33953 3 87768967 to 87768975 8 - TSS region transcription start site region 33953
Tssr33954 3 87769059 to 87769068 9 - TSS region transcription start site region 33954
Ntrk1 3 87778244 to 87795162 16918 - protein coding gene neurotrophic tyrosine kinase, receptor, type 1
Cpgi13337 3 87778417 to 87778722 305 CpG island CpG island 13337
Tssr33955 3 87783289 to 87783311 22 - TSS region transcription start site region 33955
Cpgi13338 3 87783664 to 87783970 306 CpG island CpG island 13338