Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:87567559-87788034

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm25167	3	87582672 to 87582791	119	-	snoRNA gene	predicted gene, 25167
Cpgi13333	3	87617076 to 87617897	821		CpG island	CpG island 13333
Gm24109	3	87617399 to 87617501	102	+	miRNA gene	predicted gene, 24109
Tssr29826	3	87617541 to 87617613	72	+	TSS region	transcription start site region 29826
Arhgef11	3	87617559 to 87738034	120475	+	protein coding gene	Rho guanine nucleotide exchange factor (GEF) 11
Tssr29827	3	87620917 to 87620922	5	+	TSS region	transcription start site region 29827
Tssr29828	3	87629487 to 87629496	9	+	TSS region	transcription start site region 29828
Gm19242	3	87648428 to 87648673	245	-	pseudogene	predicted gene, 19242
Tssr29829	3	87650960 to 87650963	3	+	TSS region	transcription start site region 29829
Gm6570	3	87679643 to 87680025	382	-	protein coding gene	predicted gene 6570
Tssr33944	3	87684633 to 87684644	11	-	TSS region	transcription start site region 33944
Lrrc71	3	87736923 to 87748623	11700	-	protein coding gene	leucine rich repeat containing 71
Cpgi13334	3	87742593 to 87743065	472		CpG island	CpG island 13334
Tssr33945	3	87744267 to 87744269	2	-	TSS region	transcription start site region 33945
Tssr33946	3	87748533 to 87748555	22	-	TSS region	transcription start site region 33946
Tssr33947	3	87748556 to 87748568	12	-	TSS region	transcription start site region 33947
Tssr33948	3	87748577 to 87748598	21	-	TSS region	transcription start site region 33948
Tssr33949	3	87748599 to 87748615	16	-	TSS region	transcription start site region 33949
Tssr33950	3	87748619 to 87748630	11	-	TSS region	transcription start site region 33950
Pear1	3	87749097 to 87769110	20013	-	protein coding gene	platelet endothelial aggregation receptor 1
Tssr33951	3	87753257 to 87753259	2	-	TSS region	transcription start site region 33951
Cpgi13335	3	87755863 to 87756852	989		CpG island	CpG island 13335
Cpgi13336	3	87768777 to 87769195	418		CpG island	CpG island 13336
Tssr33952	3	87768932 to 87768960	28	-	TSS region	transcription start site region 33952
Tssr33953	3	87768967 to 87768975	8	-	TSS region	transcription start site region 33953
Tssr33954	3	87769059 to 87769068	9	-	TSS region	transcription start site region 33954
Ntrk1	3	87778244 to 87795162	16918	-	protein coding gene	neurotrophic tyrosine kinase, receptor, type 1
Cpgi13337	3	87778417 to 87778722	305		CpG island	CpG island 13337
Tssr33955	3	87783289 to 87783311	22	-	TSS region	transcription start site region 33955
Cpgi13338	3	87783664 to 87783970	306		CpG island	CpG island 13338