Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:86956893-87177024

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr29796 3 86986562 to 86986584 22 + TSS region transcription start site region 29796
Cd1d2 3 86986586 to 86989533 2947 + polymorphic pseudogene CD1d2 antigen
Cd1d1 3 86995834 to 86999340 3506 - protein coding gene CD1d1 antigen
Tssr33919 3 86998997 to 86999033 36 - TSS region transcription start site region 33919
Tssr33920 3 86999264 to 86999275 11 - TSS region transcription start site region 33920
Tssr33921 3 86999284 to 86999334 50 - TSS region transcription start site region 33921
Tssr33922 3 86999347 to 86999372 25 - TSS region transcription start site region 33922
Tssr33923 3 87012244 to 87012253 9 - TSS region transcription start site region 33923
Gm8869 3 87022937 to 87023883 946 - pseudogene predicted gene 8869
Gm18403 3 87054359 to 87054887 528 + pseudogene predicted gene, 18403
Gm37575 3 87060125 to 87060433 308 + pseudogene predicted gene, 37575
Gm24472 3 87066893 to 87067024 131 + snoRNA gene predicted gene, 24472
Kirrel 3 87078593 to 87174747 96154 - protein coding gene kirre like nephrin family adhesion molecule 1
Tssr33924 3 87112271 to 87112274 3 - TSS region transcription start site region 33924
Tssr33925 3 87112436 to 87112445 9 - TSS region transcription start site region 33925
Tssr33926 3 87112463 to 87112469 6 - TSS region transcription start site region 33926
D3Mit155 3 87126643 to 87126775 132 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 155
D3Mit155.1 3 87126737 to 87126846 109 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 155.1
Gm37855 3 87157693 to 87162455 4762 + lincRNA gene predicted gene, 37855
Cpgi13330 3 87174209 to 87175037 828 CpG island CpG island 13330
Tssr33927 3 87174458 to 87174485 27 - TSS region transcription start site region 33927
Tssr33928 3 87174518 to 87174578 60 - TSS region transcription start site region 33928
Tssr33929 3 87174632 to 87174655 23 - TSS region transcription start site region 33929
Tssr33930 3 87174657 to 87174679 22 - TSS region transcription start site region 33930