Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:86895834-87099441

27 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dclk2	3	86786151 to 86920852	134701	-	protein coding gene	doublecortin-like kinase 2
Tssr33911	3	86899433 to 86899438	5	-	TSS region	transcription start site region 33911
Tssr33912	3	86902005 to 86902016	11	-	TSS region	transcription start site region 33912
Cpgi13327	3	86915290 to 86915537	247		CpG island	CpG island 13327
Cpgi13328	3	86919523 to 86921109	1586		CpG island	CpG island 13328
Tssr33913	3	86920333 to 86920348	15	-	TSS region	transcription start site region 33913
Tssr33914	3	86920363 to 86920390	27	-	TSS region	transcription start site region 33914
Tssr33915	3	86920395 to 86920413	18	-	TSS region	transcription start site region 33915
Tssr33916	3	86920488 to 86920535	47	-	TSS region	transcription start site region 33916
Tssr33917	3	86920543 to 86920565	22	-	TSS region	transcription start site region 33917
Tssr33918	3	86920830 to 86920977	147	-	TSS region	transcription start site region 33918
Cpgi13329	3	86921433 to 86921602	169		CpG island	CpG island 13329
Gm23376	3	86930743 to 86930902	159	+	snRNA gene	predicted gene, 23376
Gm37207	3	86933368 to 86933663	295	-	pseudogene	predicted gene, 37207
Tssr29796	3	86986562 to 86986584	22	+	TSS region	transcription start site region 29796
Cd1d2	3	86986586 to 86989533	2947	+	polymorphic pseudogene	CD1d2 antigen
Cd1d1	3	86995834 to 86999340	3506	-	protein coding gene	CD1d1 antigen
Tssr33919	3	86998997 to 86999033	36	-	TSS region	transcription start site region 33919
Tssr33920	3	86999264 to 86999275	11	-	TSS region	transcription start site region 33920
Tssr33921	3	86999284 to 86999334	50	-	TSS region	transcription start site region 33921
Tssr33922	3	86999347 to 86999372	25	-	TSS region	transcription start site region 33922
Tssr33923	3	87012244 to 87012253	9	-	TSS region	transcription start site region 33923
Gm8869	3	87022937 to 87023883	946	-	pseudogene	predicted gene 8869
Gm18403	3	87054359 to 87054887	528	+	pseudogene	predicted gene, 18403
Gm37575	3	87060125 to 87060433	308	+	pseudogene	predicted gene, 37575
Gm24472	3	87066893 to 87067024	131	+	snoRNA gene	predicted gene, 24472
Kirrel	3	87078593 to 87174747	96154	-	protein coding gene	kirre like nephrin family adhesion molecule 1