Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:8678682-8811824

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23670 3 8679359 to 8679477 118 - snoRNA gene predicted gene, 23670
Gm32561 3 8679438 to 8693098 13660 - lncRNA gene predicted gene, 32561
Tssr32557 3 8692879 to 8692909 30 - TSS region transcription start site region 32557
Cpgi12963 3 8717532 to 8717724 192 CpG island CpG island 12963
D3Mit264 3 8721265 to 8721372 107 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 264
Skmw1 3 8721265 to 8721372 107 QTL skeletal muscle weight 1
C230057A21Rik 3 8732870 to 8736360 3490 - lincRNA gene RIKEN cDNA C230057A21 gene
Tssr28333 3 8743642 to 8743692 50 + TSS region transcription start site region 28333
1700042O13Rik 3 8743676 to 8746823 3147 lncRNA gene RIKEN cDNA 1700042O13 gene
Gm37647 3 8743682 to 8746824 3142 - unclassified gene predicted gene, 37647
Tssr28334 3 8746960 to 8746989 29 + TSS region transcription start site region 28334
Cpgi12964 3 8766717 to 8767846 1129 CpG island CpG island 12964
Tssr28335 3 8767140 to 8767152 12 + TSS region transcription start site region 28335
Cpgi12965 3 8785773 to 8786060 287 CpG island CpG island 12965
Mrps28 3 8802146 to 8923857 121711 - protein coding gene mitochondrial ribosomal protein S28
Cpgi12966 3 8805741 to 8806051 310 CpG island CpG island 12966