Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:86177487-86547488

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D3Mit98 3 86181501 to 86181612 111 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 98
Gm23025 3 86191416 to 86191526 110 + snRNA gene predicted gene, 23025
Cpgi13324 3 86223584 to 86225310 1726 CpG island CpG island 13324
Tssr29782 3 86224199 to 86224243 44 + TSS region transcription start site region 29782
Tssr29783 3 86224665 to 86224717 52 + TSS region transcription start site region 29783
Lrba 3 86224680 to 86782692 558012 + protein coding gene LPS-responsive beige-like anchor
Gm37288 3 86263242 to 86263575 333 - pseudogene predicted gene, 37288
Tssr29784 3 86263453 to 86263457 4 + TSS region transcription start site region 29784
9430099H24Rik 3 86267653 to 86268670 1017 unclassified gene RIKEN cDNA 9430099H24 gene
Gm26343 3 86275232 to 86275362 130 - snoRNA gene predicted gene, 26343
Tssr29785 3 86312202 to 86312210 8 + TSS region transcription start site region 29785
Gm40083 3 86352016 to 86362442 10426 - lncRNA gene predicted gene, 40083
9030218A15Rik 3 86362486 to 86363578 1092 unclassified gene RIKEN cDNA 9030218A15 gene
Tssr29786 3 86362487 to 86362488 1 + TSS region transcription start site region 29786
Gm23850 3 86364457 to 86364625 168 + snRNA gene predicted gene, 23850
Gm25039 3 86384247 to 86384353 106 + snRNA gene predicted gene, 25039
Gm31677 3 86524424 to 86558716 34292 - lncRNA gene predicted gene, 31677
Tssr29787 3 86539738 to 86539747 9 + TSS region transcription start site region 29787
Tssr29788 3 86539819 to 86539832 13 + TSS region transcription start site region 29788
Tssr29789 3 86539844 to 86539855 11 + TSS region transcription start site region 29789
Tssr29790 3 86539884 to 86539907 23 + TSS region transcription start site region 29790
Mab21l2 3 86545581 to 86548283 2702 - protein coding gene mab-21-like 2
Cpgi13325 3 86546618 to 86547863 1245 CpG island CpG island 13325
Tssr33895 3 86546643 to 86546655 12 - TSS region transcription start site region 33895
Tssr33896 3 86547021 to 86547032 11 - TSS region transcription start site region 33896