Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Sh3d19 | 3 | 159417 | + | protein coding gene | SH3 domain protein D19 | |
Elads2 | 3 | 0 | QTL | ENU induced lung adenoma susceptibility 2 | ||
Gm25188 | 3 | 121 | + | snoRNA gene | predicted gene, 25188 | |
Tssr29778 | 3 | 39 | + | TSS region | transcription start site region 29778 | |
Tssr29779 | 3 | 18 | + | TSS region | transcription start site region 29779 | |
Rps3a1 | 3 | 4728 | - | protein coding gene | ribosomal protein S3A1 | |
Snord73a | 3 | 67 | - | snoRNA gene | small nucleolar RNA, C/D box U73A | |
Rnu73b | 3 | 70 | - | snoRNA gene | U73B small nuclear RNA | |
Cpgi13323 | 3 | 1257 | CpG island | CpG island 13323 | ||
Tssr33892 | 3 | 43 | - | TSS region | transcription start site region 33892 | |
Tssr33893 | 3 | 16 | - | TSS region | transcription start site region 33893 | |
Tssr33894 | 3 | 5 | - | TSS region | transcription start site region 33894 | |
Gm37933 | 3 | 2788 | + | lincRNA gene | predicted gene, 37933 | |
Tssr29780 | 3 | 26 | + | TSS region | transcription start site region 29780 | |
Tssr29781 | 3 | 28 | + | TSS region | transcription start site region 29781 | |
Gm37493 | 3 | 432 | - | pseudogene | predicted gene, 37493 | |
D3Mit98 | 3 | 111 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 98 | ||
Gm23025 | 3 | 110 | + | snRNA gene | predicted gene, 23025 | |
Cpgi13324 | 3 | 1726 | CpG island | CpG island 13324 | ||
Tssr29782 | 3 | 44 | + | TSS region | transcription start site region 29782 | |
Tssr29783 | 3 | 52 | + | TSS region | transcription start site region 29783 | |
Lrba | 3 | 558012 | + | protein coding gene | LPS-responsive beige-like anchor | |
Gm37288 | 3 | 333 | - | pseudogene | predicted gene, 37288 | |
Tssr29784 | 3 | 4 | + | TSS region | transcription start site region 29784 | |
9430099H24Rik | 3 | 1017 | unclassified gene | RIKEN cDNA 9430099H24 gene | ||
Gm26343 | 3 | 130 | - | snoRNA gene | predicted gene, 26343 | |
Tssr29785 | 3 | 8 | + | TSS region | transcription start site region 29785 | |
Gm40083 | 3 | 10426 | - | lncRNA gene | predicted gene, 40083 | |
9030218A15Rik | 3 | 1092 | unclassified gene | RIKEN cDNA 9030218A15 gene | ||
Tssr29786 | 3 | 1 | + | TSS region | transcription start site region 29786 | |
Gm23850 | 3 | 168 | + | snRNA gene | predicted gene, 23850 | |
Gm25039 | 3 | 106 | + | snRNA gene | predicted gene, 25039 | |
Gm31677 | 3 | 34292 | - | lncRNA gene | predicted gene, 31677 | |
Tssr29787 | 3 | 9 | + | TSS region | transcription start site region 29787 | |
Tssr29788 | 3 | 13 | + | TSS region | transcription start site region 29788 | |
Tssr29789 | 3 | 11 | + | TSS region | transcription start site region 29789 | |
Tssr29790 | 3 | 23 | + | TSS region | transcription start site region 29790 | |
Mab21l2 | 3 | 2702 | - | protein coding gene | mab-21-like 2 | |
Cpgi13325 | 3 | 1245 | CpG island | CpG island 13325 | ||
Tssr33895 | 3 | 12 | - | TSS region | transcription start site region 33895 | |
Tssr33896 | 3 | 11 | - | TSS region | transcription start site region 33896 | |
Tssr33897 | 3 | 29 | - | TSS region | transcription start site region 33897 | |
Cpgi13326 | 3 | 256 | CpG island | CpG island 13326 | ||
Tssr33898 | 3 | 22 | - | TSS region | transcription start site region 33898 | |
Tssr33899 | 3 | 10 | - | TSS region | transcription start site region 33899 | |
Tssr33900 | 3 | 6 | - | TSS region | transcription start site region 33900 | |
Tssr33901 | 3 | 15 | - | TSS region | transcription start site region 33901 | |
Tssr33902 | 3 | 7 | - | TSS region | transcription start site region 33902 | |
Tssr33903 | 3 | 16 | - | TSS region | transcription start site region 33903 | |
Tssr33904 | 3 | 16 | - | TSS region | transcription start site region 33904 | |
Tssr33905 | 3 | 13 | - | TSS region | transcription start site region 33905 | |
Tssr29791 | 3 | 5 | + | TSS region | transcription start site region 29791 | |
Tssr33906 | 3 | 9 | - | TSS region | transcription start site region 33906 | |
Tssr33907 | 3 | 18 | - | TSS region | transcription start site region 33907 | |
Tssr33908 | 3 | 12 | - | TSS region | transcription start site region 33908 | |
Tssr29792 | 3 | 27 | + | TSS region | transcription start site region 29792 | |
Ewc3 | 3 | 0 | QTL | ethanol withdrawal and consumption 3 | ||
Gm3788 | 3 | 135 | - | pseudogene | predicted gene 3788 | |
Gm37876 | 3 | 10582 | - | antisense lncRNA gene | predicted gene, 37876 | |
Tssr29793 | 3 | 6 | + | TSS region | transcription start site region 29793 | |
Dclk2 | 3 | 134701 | - | protein coding gene | doublecortin-like kinase 2 | |
Tssr33909 | 3 | 32 | - | TSS region | transcription start site region 33909 | |
Tssr33910 | 3 | 14 | - | TSS region | transcription start site region 33910 | |
Gm46810 | 3 | 1447 | - | lncRNA gene | predicted gene, 46810 | |
D3Ertd731e | 3 | 204 | DNA segment | DNA segment, Chr 3, ERATO Doi 731, expressed | ||
Tssr29794 | 3 | 17 | + | TSS region | transcription start site region 29794 | |
Tssr29795 | 3 | 7 | + | TSS region | transcription start site region 29795 | |
Gm37025 | 3 | 828 | + | pseudogene | predicted gene, 37025 | |
Tssr33911 | 3 | 5 | - | TSS region | transcription start site region 33911 | |
Tssr33912 | 3 | 11 | - | TSS region | transcription start site region 33912 | |
Cpgi13327 | 3 | 247 | CpG island | CpG island 13327 | ||
Cpgi13328 | 3 | 1586 | CpG island | CpG island 13328 | ||
Tssr33913 | 3 | 15 | - | TSS region | transcription start site region 33913 | |
Tssr33914 | 3 | 27 | - | TSS region | transcription start site region 33914 | |
Tssr33915 | 3 | 18 | - | TSS region | transcription start site region 33915 | |
Tssr33916 | 3 | 47 | - | TSS region | transcription start site region 33916 | |
Tssr33917 | 3 | 22 | - | TSS region | transcription start site region 33917 | |
Tssr33918 | 3 | 147 | - | TSS region | transcription start site region 33918 | |
Cpgi13329 | 3 | 169 | CpG island | CpG island 13329 | ||
Gm23376 | 3 | 159 | + | snRNA gene | predicted gene, 23376 | |
Gm37207 | 3 | 295 | - | pseudogene | predicted gene, 37207 | |
Tssr29796 | 3 | 22 | + | TSS region | transcription start site region 29796 | |
Cd1d2 | 3 | 2947 | + | polymorphic pseudogene | CD1d2 antigen | |
Cd1d1 | 3 | 3506 | - | protein coding gene | CD1d1 antigen | |
Tssr33919 | 3 | 36 | - | TSS region | transcription start site region 33919 | |
Tssr33920 | 3 | 11 | - | TSS region | transcription start site region 33920 | |
Tssr33921 | 3 | 50 | - | TSS region | transcription start site region 33921 | |
Tssr33922 | 3 | 25 | - | TSS region | transcription start site region 33922 | |
Tssr33923 | 3 | 9 | - | TSS region | transcription start site region 33923 | |
Gm8869 | 3 | 946 | - | pseudogene | predicted gene 8869 | |
Gm18403 | 3 | 528 | + | pseudogene | predicted gene, 18403 | |
Gm37575 | 3 | 308 | + | pseudogene | predicted gene, 37575 | |
Gm24472 | 3 | 131 | + | snoRNA gene | predicted gene, 24472 | |
Kirrel | 3 | 96154 | - | protein coding gene | kirre like nephrin family adhesion molecule 1 | |
Tssr33924 | 3 | 3 | - | TSS region | transcription start site region 33924 | |
Tssr33925 | 3 | 9 | - | TSS region | transcription start site region 33925 | |
Tssr33926 | 3 | 6 | - | TSS region | transcription start site region 33926 | |
D3Mit155 | 3 | 132 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 155 | ||
D3Mit155.1 | 3 | 109 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 155.1 | ||
Gm37855 | 3 | 4762 | + | lincRNA gene | predicted gene, 37855 | |
Cpgi13330 | 3 | 828 | CpG island | CpG island 13330 | ||
Tssr33927 | 3 | 27 | - | TSS region | transcription start site region 33927 | |
Tssr33928 | 3 | 60 | - | TSS region | transcription start site region 33928 | |
Tssr33929 | 3 | 23 | - | TSS region | transcription start site region 33929 | |
Tssr33930 | 3 | 22 | - | TSS region | transcription start site region 33930 | |
Gm10705 | 3 | 460 | - | pseudogene | predicted gene 10705 | |
Tssr33931 | 3 | 25 | - | TSS region | transcription start site region 33931 | |
Cpgi13331 | 3 | 289 | CpG island | CpG island 13331 | ||
Tssr33932 | 3 | 14 | - | TSS region | transcription start site region 33932 | |
Fcrls | 3 | 12980 | - | protein coding gene | Fc receptor-like S, scavenger receptor | |
Tssr33933 | 3 | 5 | - | TSS region | transcription start site region 33933 | |
hsh | 3 | 3096631 | heritable phenotypic marker | hind shaker | ||
D3Mit187 | 3 | 121 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 187 | ||
Cia5a | 3 | 1969640 | QTL | collagen induced arthritis QTL 5a | ||
D3Dcr12 | 3 | 115 | DNA segment | DNA Segment, Chr 3, Derry C. Roopenian 12 | ||
Tssr33934 | 3 | 73 | - | TSS region | transcription start site region 33934 | |
Tssr33935 | 3 | 1 | - | TSS region | transcription start site region 33935 | |
Tssr33936 | 3 | 11 | - | TSS region | transcription start site region 33936 | |
Tssr33937 | 3 | 8 | - | TSS region | transcription start site region 33937 | |
Tssr33938 | 3 | 11 | - | TSS region | transcription start site region 33938 | |
Tssr29797 | 3 | 27 | + | TSS region | transcription start site region 29797 | |
Gm31879 | 3 | 10570 | + | lncRNA gene | predicted gene, 31879 | |
D3Mit40 | 3 | 138 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 40 | ||
Sle11 | 3 | 138 | QTL | systematic lupus erythematosus susceptibility 11 | ||
D3Dcr13 | 3 | 102 | DNA segment | DNA Segment, Chr 3, Derry C. Roopenian 13 | ||
Tssr33939 | 3 | 10 | - | TSS region | transcription start site region 33939 | |
Gm31940 | 3 | 23603 | - | lncRNA gene | predicted gene, 31940 | |
Tssr29798 | 3 | 16 | + | TSS region | transcription start site region 29798 | |
Cd5l | 3 | 13192 | + | protein coding gene | CD5 antigen-like | |
Tssr29799 | 3 | 39 | + | TSS region | transcription start site region 29799 | |
Tssr29800 | 3 | 18 | + | TSS region | transcription start site region 29800 | |
Tssr29801 | 3 | 12 | + | TSS region | transcription start site region 29801 | |
Fcrl1 | 3 | 26547 | + | protein coding gene | Fc receptor-like 1 | |
Tssr29802 | 3 | 14 | + | TSS region | transcription start site region 29802 | |
Tssr29803 | 3 | 18 | + | TSS region | transcription start site region 29803 | |
Tssr29804 | 3 | 5 | + | TSS region | transcription start site region 29804 | |
Tssr33940 | 3 | 15 | - | TSS region | transcription start site region 33940 | |
Tssr29805 | 3 | 4 | + | TSS region | transcription start site region 29805 | |
Tssr29806 | 3 | 9 | + | TSS region | transcription start site region 29806 | |
Gm40084 | 3 | 3377 | + | lncRNA gene | predicted gene, 40084 | |
Tssr29807 | 3 | 23 | + | TSS region | transcription start site region 29807 | |
Fcrl5 | 3 | 64901 | + | protein coding gene | Fc receptor-like 5 | |
Tssr29808 | 3 | 21 | + | TSS region | transcription start site region 29808 | |
Tssr29809 | 3 | 9 | + | TSS region | transcription start site region 29809 | |
Gm40085 | 3 | 25171 | - | lncRNA gene | predicted gene, 40085 | |
Tssr925 | 3 | 4 | + | TSS region | transcription start site region 925 | |
Gm31998 | 3 | 4656 | + | lncRNA gene | predicted gene, 31998 | |
Tssr33941 | 3 | 9 | - | TSS region | transcription start site region 33941 | |
Tssr33942 | 3 | 15 | - | TSS region | transcription start site region 33942 | |
Tssr33943 | 3 | 12 | - | TSS region | transcription start site region 33943 | |
Tssr926 | 3 | 13 | + | TSS region | transcription start site region 926 | |
Tssr29810 | 3 | 3 | + | TSS region | transcription start site region 29810 | |
Cpgi13332 | 3 | 935 | CpG island | CpG island 13332 | ||
Etv3 | 3 | 14587 | + | protein coding gene | ets variant 3 | |
Tssr29811 | 3 | 71 | + | TSS region | transcription start site region 29811 | |
Tssr29812 | 3 | 21 | + | TSS region | transcription start site region 29812 | |
Tssr29813 | 3 | 27 | + | TSS region | transcription start site region 29813 | |
Tssr29814 | 3 | 23 | + | TSS region | transcription start site region 29814 | |
Tssr29815 | 3 | 11 | + | TSS region | transcription start site region 29815 | |
Tssr29816 | 3 | 7 | + | TSS region | transcription start site region 29816 | |
Tssr29817 | 3 | 9 | + | TSS region | transcription start site region 29817 | |
Tssr29818 | 3 | 68 | + | TSS region | transcription start site region 29818 | |
Tssr29819 | 3 | 13 | + | TSS region | transcription start site region 29819 | |
Tssr29820 | 3 | 12 | + | TSS region | transcription start site region 29820 | |
Tssr29821 | 3 | 15 | + | TSS region | transcription start site region 29821 | |
Tssr29822 | 3 | 17 | + | TSS region | transcription start site region 29822 | |
Tssr29823 | 3 | 17 | + | TSS region | transcription start site region 29823 | |
Tssr29824 | 3 | 14 | + | TSS region | transcription start site region 29824 | |
Tssr29825 | 3 | 11 | + | TSS region | transcription start site region 29825 | |
Etv3l | 3 | 524 | + | protein coding gene | ets variant 3-like | |
Gm25167 | 3 | 119 | - | snoRNA gene | predicted gene, 25167 | |
Cpgi13333 | 3 | 821 | CpG island | CpG island 13333 | ||
Gm24109 | 3 | 102 | + | miRNA gene | predicted gene, 24109 | |
Tssr29826 | 3 | 72 | + | TSS region | transcription start site region 29826 | |
Arhgef11 | 3 | 120475 | + | protein coding gene | Rho guanine nucleotide exchange factor (GEF) 11 | |
Tssr29827 | 3 | 5 | + | TSS region | transcription start site region 29827 | |
Tssr29828 | 3 | 9 | + | TSS region | transcription start site region 29828 | |
Sle18 | 3 | -38220990 | QTL | systematic lupus erythematosus susceptibility 18 |