Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:86037757-86250545

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sh3d19 3 85971109 to 86130526 159417 + protein coding gene SH3 domain protein D19
Tssr29775 3 86038837 to 86038891 54 + TSS region transcription start site region 29775
Tssr29776 3 86040531 to 86040571 40 + TSS region transcription start site region 29776
Tssr29777 3 86040805 to 86040825 20 + TSS region transcription start site region 29777
Elads2 3 86083297 to 86083297 0 QTL ENU induced lung adenoma susceptibility 2
Gm25188 3 86100534 to 86100655 121 + snoRNA gene predicted gene, 25188
Tssr29778 3 86104024 to 86104063 39 + TSS region transcription start site region 29778
Tssr29779 3 86104199 to 86104217 18 + TSS region transcription start site region 29779
Rps3a1 3 86137940 to 86142668 4728 - protein coding gene ribosomal protein S3A1
Snord73a 3 86138791 to 86138858 67 - snoRNA gene small nucleolar RNA, C/D box U73A
Rnu73b 3 86140617 to 86140687 70 - snoRNA gene U73B small nuclear RNA
Cpgi13323 3 86141834 to 86143091 1257 CpG island CpG island 13323
Tssr33892 3 86142593 to 86142636 43 - TSS region transcription start site region 33892
Tssr33893 3 86142642 to 86142658 16 - TSS region transcription start site region 33893
Tssr33894 3 86142684 to 86142689 5 - TSS region transcription start site region 33894
Gm37933 3 86142757 to 86145545 2788 + lincRNA gene predicted gene, 37933
Tssr29780 3 86143068 to 86143094 26 + TSS region transcription start site region 29780
Tssr29781 3 86143131 to 86143159 28 + TSS region transcription start site region 29781
Gm37493 3 86144937 to 86145369 432 - pseudogene predicted gene, 37493
D3Mit98 3 86181501 to 86181612 111 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 98
Gm23025 3 86191416 to 86191526 110 + snRNA gene predicted gene, 23025
Cpgi13324 3 86223584 to 86225310 1726 CpG island CpG island 13324
Tssr29782 3 86224199 to 86224243 44 + TSS region transcription start site region 29782
Tssr29783 3 86224665 to 86224717 52 + TSS region transcription start site region 29783
Lrba 3 86224680 to 86782692 558012 + protein coding gene LPS-responsive beige-like anchor