Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:84726687-85323574

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13316 3 84732251 to 84732447 196 CpG island CpG island 13316
D3Mit139 3 84736136 to 84736220 84 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 139
Gm40079 3 84744975 to 84792206 47231 + lncRNA gene predicted gene, 40079
D3Mit340 3 84798887 to 84798999 112 DNA segment DNA Segment, Chr 3 Massachusetts Institute of Technology 340
Cpgi13317 3 84813868 to 84815905 2037 CpG island CpG island 13317
Tssr29740 3 84814583 to 84814658 75 + TSS region transcription start site region 29740
Fbxw7 3 84815268 to 84979198 163930 + protein coding gene F-box and WD-40 domain protein 7
Tssr29741 3 84817306 to 84817312 6 + TSS region transcription start site region 29741
Tssr29742 3 84829786 to 84829790 4 + TSS region transcription start site region 29742
Gm40080 3 84841973 to 84884842 42869 - lncRNA gene predicted gene, 40080
Tssr29743 3 84843226 to 84843236 10 + TSS region transcription start site region 29743
Tssr29744 3 84858821 to 84858826 5 + TSS region transcription start site region 29744
Tssr29745 3 84869478 to 84869485 7 + TSS region transcription start site region 29745
Gm37726 3 84873891 to 84877776 3885 + unclassified gene predicted gene, 37726
Tssr33878 3 84875518 to 84875529 11 - TSS region transcription start site region 33878
Tssr29746 3 84905896 to 84905908 12 + TSS region transcription start site region 29746
Tssr29747 3 84912471 to 84912483 12 + TSS region transcription start site region 29747
Tssr29748 3 84912553 to 84912572 19 + TSS region transcription start site region 29748
Gm46808 3 84912897 to 84913430 533 - pseudogene predicted gene, 46808
Tssr33879 3 84913557 to 84913565 8 - TSS region transcription start site region 33879
Tssr29749 3 84918267 to 84918273 6 + TSS region transcription start site region 29749
Tssr29750 3 84925455 to 84925472 17 + TSS region transcription start site region 29750
Tssr29751 3 84925476 to 84925488 12 + TSS region transcription start site region 29751
Tssr29752 3 84952167 to 84952186 19 + TSS region transcription start site region 29752
Tssr29753 3 84952188 to 84952200 12 + TSS region transcription start site region 29753
Tssr29754 3 84952203 to 84952230 27 + TSS region transcription start site region 29754
Tssr29755 3 84952269 to 84952291 22 + TSS region transcription start site region 29755
Tssr29756 3 84952333 to 84952409 76 + TSS region transcription start site region 29756
Tssr29757 3 84952427 to 84952435 8 + TSS region transcription start site region 29757
Tssr29758 3 84952457 to 84952474 17 + TSS region transcription start site region 29758
Tssr29759 3 84952489 to 84952500 11 + TSS region transcription start site region 29759
Tssr29760 3 84952523 to 84952538 15 + TSS region transcription start site region 29760
Fbxw7as1 3 84965056 to 84965580 524 - antisense lncRNA gene F-box and WD-40 domain protein 7 antisense transcript 1
Tssr29761 3 84977566 to 84977595 29 + TSS region transcription start site region 29761
Tssr29762 3 84977946 to 84977961 15 + TSS region transcription start site region 29762
Tssr29763 3 84978129 to 84978133 4 + TSS region transcription start site region 29763
Gm30944 3 85021687 to 85028574 6887 + lncRNA gene predicted gene, 30944
Tssr33880 3 85037954 to 85037956 2 - TSS region transcription start site region 33880
Gm30991 3 85049140 to 85107896 58756 + lncRNA gene predicted gene, 30991
Gm31096 3 85114984 to 85122505 7521 - lncRNA gene predicted gene, 31096
Gm38041 3 85152036 to 85152696 660 - pseudogene predicted gene, 38041
Cpgi13318 3 85186652 to 85186964 312 CpG island CpG island 13318
Gm38313 3 85195182 to 85196447 1265 - unclassified gene predicted gene, 38313
Cpgi13319 3 85280539 to 85280824 285 CpG island CpG island 13319
D3Mit281 3 85284759 to 85284876 117 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 281
1700036G14Rik 3 85317519 to 85332027 14508 + antisense lncRNA gene RIKEN cDNA 1700036G14 gene