Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:84658887-84938999

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13315 3 84666152 to 84666487 335 CpG island CpG island 13315
Tmem154 3 84666192 to 84704575 38383 + protein coding gene transmembrane protein 154
Tssr29738 3 84666229 to 84666288 59 + TSS region transcription start site region 29738
Tssr29739 3 84666304 to 84666354 50 + TSS region transcription start site region 29739
Cpgi13316 3 84732251 to 84732447 196 CpG island CpG island 13316
D3Mit139 3 84736136 to 84736220 84 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 139
Gm40079 3 84744975 to 84792206 47231 + lncRNA gene predicted gene, 40079
D3Mit340 3 84798887 to 84798999 112 DNA segment DNA Segment, Chr 3 Massachusetts Institute of Technology 340
Cpgi13317 3 84813868 to 84815905 2037 CpG island CpG island 13317
Tssr29740 3 84814583 to 84814658 75 + TSS region transcription start site region 29740
Fbxw7 3 84815268 to 84979198 163930 + protein coding gene F-box and WD-40 domain protein 7
Tssr29741 3 84817306 to 84817312 6 + TSS region transcription start site region 29741
Tssr29742 3 84829786 to 84829790 4 + TSS region transcription start site region 29742
Gm40080 3 84841973 to 84884842 42869 - lncRNA gene predicted gene, 40080
Tssr29743 3 84843226 to 84843236 10 + TSS region transcription start site region 29743
Tssr29744 3 84858821 to 84858826 5 + TSS region transcription start site region 29744
Tssr29745 3 84869478 to 84869485 7 + TSS region transcription start site region 29745
Gm37726 3 84873891 to 84877776 3885 + unclassified gene predicted gene, 37726
Tssr33878 3 84875518 to 84875529 11 - TSS region transcription start site region 33878
Tssr29746 3 84905896 to 84905908 12 + TSS region transcription start site region 29746
Tssr29747 3 84912471 to 84912483 12 + TSS region transcription start site region 29747
Tssr29748 3 84912553 to 84912572 19 + TSS region transcription start site region 29748
Gm46808 3 84912897 to 84913430 533 - pseudogene predicted gene, 46808
Tssr33879 3 84913557 to 84913565 8 - TSS region transcription start site region 33879
Tssr29749 3 84918267 to 84918273 6 + TSS region transcription start site region 29749
Tssr29750 3 84925455 to 84925472 17 + TSS region transcription start site region 29750
Tssr29751 3 84925476 to 84925488 12 + TSS region transcription start site region 29751