Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:83853437-84204280

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr33836 3 83859742 to 83859748 6 - TSS region transcription start site region 33836
Tssr921 3 83863026 to 83863037 11 - TSS region transcription start site region 921
Tssr33837 3 83863064 to 83863075 11 - TSS region transcription start site region 33837
Tssr29727 3 83863253 to 83863302 49 + TSS region transcription start site region 29727
Tmem131l 3 83898205 to 84040182 141977 - protein coding gene transmembrane 131 like
Tssr33838 3 83980896 to 83980901 5 - TSS region transcription start site region 33838
4930509B17Rik 3 84028437 to 84029280 843 unclassified gene RIKEN cDNA 4930509B17 gene
Cpgi13304 3 84038940 to 84040871 1931 CpG island CpG island 13304
Tssr29728 3 84039378 to 84039382 4 + TSS region transcription start site region 29728
Tssr33839 3 84039875 to 84039905 30 - TSS region transcription start site region 33839
Tssr33840 3 84040100 to 84040147 47 - TSS region transcription start site region 33840
Tssr33841 3 84040151 to 84040171 20 - TSS region transcription start site region 33841
Gm30352 3 84040221 to 84052100 11879 + lncRNA gene predicted gene, 30352
Tssr33842 3 84040256 to 84040263 7 - TSS region transcription start site region 33842
Tssr33843 3 84040276 to 84040290 14 - TSS region transcription start site region 33843
Tssr33844 3 84040292 to 84040321 29 - TSS region transcription start site region 33844
Tssr33845 3 84041981 to 84042000 19 - TSS region transcription start site region 33845
Gm36981 3 84058968 to 84063452 4484 - unclassified non-coding RNA gene predicted gene, 36981
Gm30458 3 84061741 to 84062773 1032 + lncRNA gene predicted gene, 30458
Tssr29729 3 84071998 to 84072004 6 + TSS region transcription start site region 29729
Mnd1 3 84087933 to 84155786 67853 - protein coding gene meiotic nuclear divisions 1
Cpgi13305 3 84155316 to 84155962 646 CpG island CpG island 13305
Tssr922 3 84155521 to 84155532 11 + TSS region transcription start site region 922
Tssr33846 3 84155735 to 84155754 19 - TSS region transcription start site region 33846
Tssr33847 3 84155762 to 84155796 34 - TSS region transcription start site region 33847
Trim2 3 84160439 to 84305841 145402 - protein coding gene tripartite motif-containing 2
Gm6525 3 84174638 to 84175193 555 + protein coding gene predicted pseudogene 6525
Tssr29730 3 84180588 to 84180612 24 + TSS region transcription start site region 29730
Tssr29731 3 84189985 to 84190022 37 + TSS region transcription start site region 29731
Cpgi13306 3 84190404 to 84191286 882 CpG island CpG island 13306
Tssr33848 3 84191182 to 84191193 11 - TSS region transcription start site region 33848
Tssr33849 3 84191223 to 84191236 13 - TSS region transcription start site region 33849
Tssr33850 3 84191242 to 84191315 73 - TSS region transcription start site region 33850