Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:83404974-83825223

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38096 3 83403402 to 83405790 2388 + lincRNA gene predicted gene, 38096
1700028M03Rik 3 83555367 to 83574118 18751 - lincRNA gene RIKEN cDNA 1700028M03 gene
Gm40076 3 83596327 to 83601087 4760 - lncRNA gene predicted gene, 40076
Tssr33827 3 83601536 to 83601557 21 - TSS region transcription start site region 33827
D3Mit246 3 83614974 to 83615223 249 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 246
Gm22342 3 83634577 to 83634874 297 - unclassified non-coding RNA gene predicted gene, 22342
Tssr29717 3 83686675 to 83686681 6 + TSS region transcription start site region 29717
Rpl28-ps2 3 83686679 to 83687154 475 + pseudogene ribosomal protein L28, pseudogene 2
Gm24584 3 83702252 to 83702358 106 + snRNA gene predicted gene, 24584
Gm30293 3 83719356 to 83727367 8011 - lncRNA gene predicted gene, 30293
Cpgi13298 3 83764066 to 83764642 576 CpG island CpG island 13298
Cpgi13299 3 83765775 to 83767096 1321 CpG island CpG island 13299
Tssr29718 3 83766173 to 83766187 14 + TSS region transcription start site region 29718
Tssr29719 3 83766300 to 83766331 31 + TSS region transcription start site region 29719
Sfrp2 3 83766321 to 83774316 7995 + protein coding gene secreted frizzled-related protein 2
Tssr29720 3 83766602 to 83766613 11 + TSS region transcription start site region 29720
Tssr29721 3 83766616 to 83766621 5 + TSS region transcription start site region 29721
Tssr29722 3 83766628 to 83766639 11 + TSS region transcription start site region 29722
Tssr29723 3 83766661 to 83766672 11 + TSS region transcription start site region 29723
Tssr29724 3 83766979 to 83766990 11 + TSS region transcription start site region 29724
Cpgi13300 3 83773134 to 83773504 370 CpG island CpG island 13300
Tssr33828 3 83773173 to 83773193 20 - TSS region transcription start site region 33828
Tssr29725 3 83773847 to 83773860 13 + TSS region transcription start site region 29725
Gm26771 3 83773853 to 83789956 16103 - antisense lncRNA gene predicted gene, 26771
Tssr33829 3 83774669 to 83774673 4 - TSS region transcription start site region 33829
Cpgi13301 3 83789517 to 83790148 631 CpG island CpG island 13301
Tssr33830 3 83789940 to 83789961 21 - TSS region transcription start site region 33830
Tssr33831 3 83789973 to 83789992 19 - TSS region transcription start site region 33831
Gm7115 3 83811471 to 83832219 20748 + pseudogene predicted gene 7115