Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:83013849-83696362

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116 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Splq6 3 10184161 to 83277639 73093478 QTL spleen weight QTL 6
W10q3 3 10184161 to 83277639 73093478 QTL weight 10 weeks QTL 3
Hrtpq1 3 10184161 to 83277639 73093478 QTL heart weight percentage QTL 1
Lgaq4 3 10184161 to 83277639 73093478 QTL late growth adjusted QTL 4
Lgq3 3 10184161 to 83277639 73093478 QTL late growth QTL 3
Lvrq5 3 10184161 to 83277639 73093478 QTL liver weight QTL 5
Fgg 3 83007724 to 83015049 7325 + protein coding gene fibrinogen gamma chain
Tssr29659 3 83014133 to 83014153 20 + TSS region transcription start site region 29659
Tssr29660 3 83026147 to 83026162 15 + TSS region transcription start site region 29660
Fga 3 83026153 to 83033627 7474 + protein coding gene fibrinogen alpha chain
Tssr29661 3 83028541 to 83028548 7 + TSS region transcription start site region 29661
Tssr29662 3 83028561 to 83028597 36 + TSS region transcription start site region 29662
Tssr29663 3 83028603 to 83028614 11 + TSS region transcription start site region 29663
Tssr29664 3 83029077 to 83029097 20 + TSS region transcription start site region 29664
Tssr29665 3 83029105 to 83029136 31 + TSS region transcription start site region 29665
Tssr29666 3 83029161 to 83029172 11 + TSS region transcription start site region 29666
Tssr29667 3 83029197 to 83029215 18 + TSS region transcription start site region 29667
Tssr29668 3 83030198 to 83030209 11 + TSS region transcription start site region 29668
Tssr29669 3 83030242 to 83030259 17 + TSS region transcription start site region 29669
Tssr29670 3 83030286 to 83030296 10 + TSS region transcription start site region 29670
Tssr29671 3 83030830 to 83030845 15 + TSS region transcription start site region 29671
Tssr29672 3 83030933 to 83030938 5 + TSS region transcription start site region 29672
Tssr29673 3 83030961 to 83030985 24 + TSS region transcription start site region 29673
Tssr29674 3 83031010 to 83031019 9 + TSS region transcription start site region 29674
Tssr29675 3 83031020 to 83031025 5 + TSS region transcription start site region 29675
Tssr29676 3 83031030 to 83031039 9 + TSS region transcription start site region 29676
Tssr29677 3 83031047 to 83031054 7 + TSS region transcription start site region 29677
Tssr33800 3 83031102 to 83031123 21 - TSS region transcription start site region 33800
Tssr29678 3 83031126 to 83031129 3 + TSS region transcription start site region 29678
Tssr29679 3 83031170 to 83031188 18 + TSS region transcription start site region 29679
Tssr29680 3 83031193 to 83031212 19 + TSS region transcription start site region 29680
Tssr29681 3 83031295 to 83031314 19 + TSS region transcription start site region 29681
Tssr29682 3 83031318 to 83031345 27 + TSS region transcription start site region 29682
Tssr29683 3 83031361 to 83031376 15 + TSS region transcription start site region 29683
Tssr29684 3 83031386 to 83031415 29 + TSS region transcription start site region 29684
Tssr29685 3 83031427 to 83031461 34 + TSS region transcription start site region 29685
Tssr33801 3 83031447 to 83031486 39 - TSS region transcription start site region 33801
Tssr29686 3 83031493 to 83031550 57 + TSS region transcription start site region 29686
Tssr33802 3 83031583 to 83031610 27 - TSS region transcription start site region 33802
Tssr29687 3 83031591 to 83031603 12 + TSS region transcription start site region 29687
Tssr29688 3 83031615 to 83031628 13 + TSS region transcription start site region 29688
Tssr29689 3 83031641 to 83031652 11 + TSS region transcription start site region 29689
Tssr29690 3 83031671 to 83031680 9 + TSS region transcription start site region 29690
Tssr917 3 83031698 to 83031701 3 + TSS region transcription start site region 917
Tssr29691 3 83031717 to 83031730 13 + TSS region transcription start site region 29691
Tssr29692 3 83031733 to 83031748 15 + TSS region transcription start site region 29692
Tssr29693 3 83031764 to 83031775 11 + TSS region transcription start site region 29693
Tssr29694 3 83031797 to 83031821 24 + TSS region transcription start site region 29694
Tssr29695 3 83031823 to 83031834 11 + TSS region transcription start site region 29695
Tssr29696 3 83031836 to 83031855 19 + TSS region transcription start site region 29696
Tssr29697 3 83031860 to 83031882 22 + TSS region transcription start site region 29697
Tssr29698 3 83031997 to 83032032 35 + TSS region transcription start site region 29698
Tssr29699 3 83032079 to 83032089 10 + TSS region transcription start site region 29699
Tssr29700 3 83032092 to 83032100 8 + TSS region transcription start site region 29700
Tssr29701 3 83032124 to 83032132 8 + TSS region transcription start site region 29701
Gm40075 3 83037077 to 83038974 1897 - lncRNA gene predicted gene, 40075
D3Mit9.1 3 83037583 to 83037702 119 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 9.1
Tssr33803 3 83041017 to 83041024 7 - TSS region transcription start site region 33803
Fgb 3 83042246 to 83049863 7617 - protein coding gene fibrinogen beta chain
Tssr29702 3 83042420 to 83042444 24 + TSS region transcription start site region 29702
Tssr33804 3 83042455 to 83042468 13 - TSS region transcription start site region 33804
Tssr29703 3 83042462 to 83042479 17 + TSS region transcription start site region 29703
Tssr29704 3 83043219 to 83043250 31 + TSS region transcription start site region 29704
Tssr29705 3 83043319 to 83043349 30 + TSS region transcription start site region 29705
Tssr33805 3 83043396 to 83043407 11 - TSS region transcription start site region 33805
Tssr29706 3 83043401 to 83043438 37 + TSS region transcription start site region 29706
Tssr33806 3 83043460 to 83043477 17 - TSS region transcription start site region 33806
Tssr33807 3 83043795 to 83043805 10 - TSS region transcription start site region 33807
Tssr33808 3 83043866 to 83043877 11 - TSS region transcription start site region 33808
Tssr29707 3 83043871 to 83043879 8 + TSS region transcription start site region 29707
Tssr33809 3 83043882 to 83043909 27 - TSS region transcription start site region 33809
Tssr29708 3 83044210 to 83044236 26 + TSS region transcription start site region 29708
Tssr33810 3 83044247 to 83044313 66 - TSS region transcription start site region 33810
Tssr33811 3 83044912 to 83044966 54 - TSS region transcription start site region 33811
Tssr33812 3 83044996 to 83045001 5 - TSS region transcription start site region 33812
Tssr33813 3 83045005 to 83045059 54 - TSS region transcription start site region 33813
Tssr33814 3 83045970 to 83045973 3 - TSS region transcription start site region 33814
Tssr33815 3 83046075 to 83046081 6 - TSS region transcription start site region 33815
Tssr33816 3 83046105 to 83046143 38 - TSS region transcription start site region 33816
Tssr29709 3 83046118 to 83046135 17 + TSS region transcription start site region 29709
Tssr33817 3 83046153 to 83046189 36 - TSS region transcription start site region 33817
Tssr29710 3 83046642 to 83046659 17 + TSS region transcription start site region 29710
Tssr29711 3 83046664 to 83046676 12 + TSS region transcription start site region 29711
Tssr33818 3 83046675 to 83046683 8 - TSS region transcription start site region 33818
Tssr33819 3 83046686 to 83046714 28 - TSS region transcription start site region 33819
Tssr29712 3 83046689 to 83046716 27 + TSS region transcription start site region 29712
Tssr33820 3 83046722 to 83046739 17 - TSS region transcription start site region 33820
Tssr33821 3 83046740 to 83046758 18 - TSS region transcription start site region 33821
Tssr33822 3 83046778 to 83046792 14 - TSS region transcription start site region 33822
Tssr33823 3 83046797 to 83046808 11 - TSS region transcription start site region 33823
Tssr33824 3 83046819 to 83046846 27 - TSS region transcription start site region 33824
Tssr33825 3 83049114 to 83049129 15 - TSS region transcription start site region 33825
Tssr33826 3 83049797 to 83049817 20 - TSS region transcription start site region 33826
Cpgi13295 3 83055045 to 83056029 984 CpG island CpG island 13295
Tssr29713 3 83055516 to 83055565 49 + TSS region transcription start site region 29713
Plrg1 3 83055538 to 83072291 16753 + protein coding gene pleiotropic regulator 1
Tssr29714 3 83055575 to 83055585 10 + TSS region transcription start site region 29714
Tssr29715 3 83055594 to 83055609 15 + TSS region transcription start site region 29715
Gm10710 3 83125276 to 83129240 3964 - lincRNA gene predicted gene 10710
Cpgi13296 3 83127169 to 83129741 2572 CpG island CpG island 13296
Tssr29716 3 83127503 to 83127540 37 + TSS region transcription start site region 29716
Cia5 3 83139351 to 83139488 137 QTL collagen induced arthritis QTL 5
D3Mit72 3 83139351 to 83139488 137 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 72
D3Mit174 3 83213937 to 83214077 140 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 174
D3Mit97 3 83277524 to 83277639 115 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 97
Cpgi13297 3 83304775 to 83304931 156 CpG island CpG island 13297
D3Mit212 3 83317410 to 83317530 120 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 212
Dchs2 3 83353849 to 83356362 2513 + protein coding gene dachsous cadherin related 2
Gm38096 3 83403402 to 83405790 2388 + lincRNA gene predicted gene, 38096
1700028M03Rik 3 83555367 to 83574118 18751 - lincRNA gene RIKEN cDNA 1700028M03 gene
Gm40076 3 83596327 to 83601087 4760 - lncRNA gene predicted gene, 40076
Tssr33827 3 83601536 to 83601557 21 - TSS region transcription start site region 33827
D3Mit246 3 83614974 to 83615223 249 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 246
Gm22342 3 83634577 to 83634874 297 - unclassified non-coding RNA gene predicted gene, 22342
Tssr29717 3 83686675 to 83686681 6 + TSS region transcription start site region 29717
Rpl28-ps2 3 83686679 to 83687154 475 + pseudogene ribosomal protein L28, pseudogene 2