Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:82787582-83008974

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm22038 3 82793656 to 82793897 241 - unclassified non-coding RNA gene predicted gene, 22038
Gm43348 3 82794975 to 82812234 17259 - lincRNA gene predicted gene 43348
Elads1 3 82802039 to 82802039 0 QTL ENU induced lung adenoma susceptibility 1
Rbm46 3 82837228 to 82876483 39255 - protein coding gene RNA binding motif protein 46
Cpgi13292 3 82875786 to 82876735 949 CpG island CpG island 13292
Tssr33791 3 82876383 to 82876423 40 - TSS region transcription start site region 33791
Tssr33792 3 82876508 to 82876527 19 - TSS region transcription start site region 33792
Tssr29638 3 82876696 to 82876707 11 + TSS region transcription start site region 29638
Rbm46os 3 82876705 to 82943638 66933 + antisense lncRNA gene RNA binding motif protein 46, opposite strand
Lrat 3 82892582 to 82903974 11392 - protein coding gene lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
Cpgi13293 3 82903346 to 82904671 1325 CpG island CpG island 13293
Tssr33793 3 82903917 to 82903928 11 - TSS region transcription start site region 33793
Tssr915 3 82903953 to 82903960 7 - TSS region transcription start site region 915
Tssr33794 3 82903963 to 82903981 18 - TSS region transcription start site region 33794
Gm30097 3 82981476 to 83008415 26939 - lincRNA gene predicted gene, 30097
Cpgi13294 3 82995419 to 82995739 320 CpG island CpG island 13294
Fgg 3 83007724 to 83015049 7325 + protein coding gene fibrinogen gamma chain
Tssr29639 3 83007850 to 83007868 18 + TSS region transcription start site region 29639
Tssr29640 3 83008143 to 83008172 29 + TSS region transcription start site region 29640
Tssr29641 3 83008368 to 83008409 41 + TSS region transcription start site region 29641
Tssr29642 3 83008419 to 83008444 25 + TSS region transcription start site region 29642
Tssr29643 3 83008450 to 83008485 35 + TSS region transcription start site region 29643
Tssr29644 3 83008493 to 83008504 11 + TSS region transcription start site region 29644
Tssr916 3 83008506 to 83008514 8 + TSS region transcription start site region 916
Tssr29645 3 83008514 to 83008532 18 + TSS region transcription start site region 29645
Tssr33795 3 83008524 to 83008535 11 - TSS region transcription start site region 33795
Tssr29646 3 83008635 to 83008671 36 + TSS region transcription start site region 29646
Tssr33796 3 83008665 to 83008702 37 - TSS region transcription start site region 33796
Tssr29647 3 83008696 to 83008718 22 + TSS region transcription start site region 29647