MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:81867601-82021725

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm22531	3	81880727 to 81880866	139	+	snoRNA gene	predicted gene, 22531
Gm9989	3	81918008 to 81924463	6455	-	lncRNA gene	predicted gene 9989
Cpgi13284	3	81932569 to 81932843	274		CpG island	CpG island 13284
Ctso	3	81932601 to 81956725	24124	+	protein coding gene	cathepsin O
Tssr29625	3	81932608 to 81932634	26	+	TSS region	transcription start site region 29625
Tssr29626	3	81932635 to 81932664	29	+	TSS region	transcription start site region 29626
Tssr29627	3	81932666 to 81932680	14	+	TSS region	transcription start site region 29627
Tdo2	3	81958412 to 81975728	17316	-	protein coding gene	tryptophan 2,3-dioxygenase
Tssr33774	3	81958611 to 81958620	9	-	TSS region	transcription start site region 33774
Tssr33775	3	81965101 to 81965105	4	-	TSS region	transcription start site region 33775
Tssr33776	3	81965137 to 81965159	22	-	TSS region	transcription start site region 33776
Tssr33777	3	81968283 to 81968285	2	-	TSS region	transcription start site region 33777
Tssr33778	3	81974543 to 81974550	7	-	TSS region	transcription start site region 33778
Tssr33779	3	81975742 to 81975760	18	-	TSS region	transcription start site region 33779
Tssr33780	3	81975859 to 81975861	2	-	TSS region	transcription start site region 33780
Asic5	3	81982293 to 82021233	38940	+	protein coding gene	acid-sensing (proton-gated) ion channel family member 5
Tssr29628	3	81995696 to 81995709	13	+	TSS region	transcription start site region 29628
D3Mit229	3	82019057 to 82019156	99		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 229