Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:80582904-80903204

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gria2	3	80682904 to 80803204	120300	-	protein coding gene	glutamate receptor, ionotropic, AMPA2 (alpha 2)
Tssr29614	3	80687990 to 80687994	4	+	TSS region	transcription start site region 29614
Tssr33755	3	80688116 to 80688130	14	-	TSS region	transcription start site region 33755
Tssr33756	3	80688135 to 80688146	11	-	TSS region	transcription start site region 33756
Tssr33757	3	80688268 to 80688305	37	-	TSS region	transcription start site region 33757
Tssr33758	3	80688319 to 80688334	15	-	TSS region	transcription start site region 33758
Tssr33759	3	80688337 to 80688365	28	-	TSS region	transcription start site region 33759
Tssr33760	3	80688445 to 80688466	21	-	TSS region	transcription start site region 33760
Tssr33761	3	80688474 to 80688488	14	-	TSS region	transcription start site region 33761
Tssr33762	3	80691137 to 80691146	9	-	TSS region	transcription start site region 33762
Gm25749	3	80692203 to 80692313	110	-	miRNA gene	predicted gene, 25749
Tssr33763	3	80717488 to 80717490	2	-	TSS region	transcription start site region 33763
Tssr33764	3	80797980 to 80797996	16	-	TSS region	transcription start site region 33764
Cpgi13280	3	80800436 to 80801470	1034		CpG island	CpG island 13280
Tssr29615	3	80800525 to 80800532	7	+	TSS region	transcription start site region 29615
Tssr29616	3	80800546 to 80800555	9	+	TSS region	transcription start site region 29616
Cpgi13281	3	80802510 to 80803168	658		CpG island	CpG island 13281
Tssr33765	3	80802590 to 80802601	11	-	TSS region	transcription start site region 33765
Tssr33766	3	80802604 to 80802617	13	-	TSS region	transcription start site region 33766
Tssr33767	3	80802633 to 80802644	11	-	TSS region	transcription start site region 33767
Tssr33768	3	80802651 to 80802672	21	-	TSS region	transcription start site region 33768
Tssr33769	3	80802679 to 80802730	51	-	TSS region	transcription start site region 33769
Tssr33770	3	80802745 to 80802770	25	-	TSS region	transcription start site region 33770
Tssr33771	3	80802789 to 80802840	51	-	TSS region	transcription start site region 33771
2900092N11Rik	3	80843154 to 80843546	392		unclassified gene	RIKEN cDNA 2900092N11 gene
Glrb	3	80843599 to 80913660	70061	-	protein coding gene	glycine receptor, beta subunit
Tssr33772	3	80879696 to 80879715	19	-	TSS region	transcription start site region 33772
Gm18545	3	80885092 to 80886992	1900	+	pseudogene	predicted gene, 18545