Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:79595678-80205682

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppid 3 79591389 to 79603650 12261 + protein coding gene peptidylprolyl isomerase D (cyclophilin D)
Etfdh 3 79603788 to 79628767 24979 - protein coding gene electron transferring flavoprotein, dehydrogenase
Gm37973 3 79610538 to 79611826 1288 - unclassified gene predicted gene, 37973
Tssr33733 3 79622788 to 79622795 7 - TSS region transcription start site region 33733
Cpgi13277 3 79628490 to 79629686 1196 CpG island CpG island 13277
Tssr33734 3 79628636 to 79628647 11 - TSS region transcription start site region 33734
Tssr33735 3 79628660 to 79628745 85 - TSS region transcription start site region 33735
Tssr33736 3 79628752 to 79628763 11 - TSS region transcription start site region 33736
Tssr33737 3 79628859 to 79628870 11 - TSS region transcription start site region 33737
Tssr33738 3 79628884 to 79628885 1 - TSS region transcription start site region 33738
Tssr29588 3 79629074 to 79629115 41 + TSS region transcription start site region 29588
4930579G24Rik 3 79629079 to 79632820 3741 + protein coding gene RIKEN cDNA 4930579G24 gene
Tssr29589 3 79629117 to 79629134 17 + TSS region transcription start site region 29589
Tssr29590 3 79629139 to 79629176 37 + TSS region transcription start site region 29590
Rxfp1 3 79641611 to 79737880 96269 - protein coding gene relaxin/insulin-like family peptide receptor 1
Gm26984 3 79673367 to 79676876 3509 - sense intronic lncRNA gene predicted gene, 26984
D3Mit26.2 3 79680094 to 79680257 163 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 26.2
D3Mit26 3 79680241 to 79680390 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 26
D3Mit244.2 3 79732751 to 79732894 143 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 244.2
Tssr33739 3 79737871 to 79737895 24 - TSS region transcription start site region 33739
Tssr33740 3 79737901 to 79737912 11 - TSS region transcription start site region 33740
Tssr33741 3 79790331 to 79790355 24 - TSS region transcription start site region 33741
Tssr911 3 79795522 to 79795527 5 + TSS region transcription start site region 911
Tmem144 3 79812564 to 79852773 40209 - protein coding gene transmembrane protein 144
Tssr33742 3 79825465 to 79825478 13 - TSS region transcription start site region 33742
Tssr33743 3 79825492 to 79825506 14 - TSS region transcription start site region 33743
Tssr33744 3 79825519 to 79825536 17 - TSS region transcription start site region 33744
Tssr33745 3 79825537 to 79825559 22 - TSS region transcription start site region 33745
Tssr33746 3 79825562 to 79825572 10 - TSS region transcription start site region 33746
Tssr33747 3 79825588 to 79825601 13 - TSS region transcription start site region 33747
Gm26420 3 79834933 to 79835035 102 + snRNA gene predicted gene, 26420
Cpgi13278 3 79842625 to 79842952 327 CpG island CpG island 13278
Tssr33748 3 79842642 to 79842684 42 - TSS region transcription start site region 33748
Tssr29591 3 79842759 to 79842785 26 + TSS region transcription start site region 29591
Tssr33749 3 79842857 to 79842932 75 - TSS region transcription start site region 33749
Tssr33750 3 79843436 to 79843442 6 - TSS region transcription start site region 33750
Tssr33751 3 79852760 to 79852784 24 - TSS region transcription start site region 33751
Gm40073 3 79852873 to 79856663 3790 + lncRNA gene predicted gene, 40073
Tssr29592 3 79852894 to 79852913 19 + TSS region transcription start site region 29592
Gm36569 3 79859293 to 79886806 27513 - antisense lncRNA gene predicted gene, 36569
Tssr29593 3 79860613 to 79860645 32 + TSS region transcription start site region 29593
Tssr29594 3 79877261 to 79877283 22 + TSS region transcription start site region 29594
Tssr29595 3 79877284 to 79877306 22 + TSS region transcription start site region 29595
D3Mit310 3 79880593 to 79880680 87 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology 310
Tssr29596 3 79884496 to 79884571 75 + TSS region transcription start site region 29596
Gask1b 3 79884533 to 79946280 61747 + protein coding gene golgi associated kinase 1B
Tssr29597 3 79884576 to 79884592 16 + TSS region transcription start site region 29597
Tssr29598 3 79885024 to 79885090 66 + TSS region transcription start site region 29598
Tssr29599 3 79885106 to 79885119 13 + TSS region transcription start site region 29599
Tssr29600 3 79885152 to 79885168 16 + TSS region transcription start site region 29600
Tssr29601 3 79885183 to 79885197 14 + TSS region transcription start site region 29601
Tssr29602 3 79885949 to 79886002 53 + TSS region transcription start site region 29602
Tssr29603 3 79886040 to 79886064 24 + TSS region transcription start site region 29603
Cpgi13279 3 79886057 to 79886691 634 CpG island CpG island 13279
Tssr29604 3 79886112 to 79886121 9 + TSS region transcription start site region 29604
Tssr33752 3 79886163 to 79886173 10 - TSS region transcription start site region 33752
Tssr33753 3 79886181 to 79886238 57 - TSS region transcription start site region 33753
Tssr29605 3 79886181 to 79886209 28 + TSS region transcription start site region 29605
Tssr29606 3 79886214 to 79886227 13 + TSS region transcription start site region 29606
Tssr33754 3 79886796 to 79886822 26 - TSS region transcription start site region 33754
Tssr29607 3 79886884 to 79886895 11 + TSS region transcription start site region 29607
Tssr29608 3 79886902 to 79886955 53 + TSS region transcription start site region 29608
Tssr29609 3 79900678 to 79900682 4 + TSS region transcription start site region 29609
Tssr29610 3 79908646 to 79908657 11 + TSS region transcription start site region 29610
Tssr29611 3 79936437 to 79936446 9 + TSS region transcription start site region 29611
Tssr29612 3 79936464 to 79936470 6 + TSS region transcription start site region 29612
Gm40074 3 80059872 to 80101607 41735 + lncRNA gene predicted gene, 40074
Gm19066 3 80088114 to 80089161 1047 - pseudogene predicted gene, 19066
Gm43839 3 80134132 to 80136456 2324 + unclassified gene predicted gene 43839
Gm38295 3 80194480 to 80194630 150 - pseudogene predicted gene, 38295
Gm37892 3 80202492 to 80205598 3106 - antisense lncRNA gene predicted gene, 37892
A330069K06Rik 3 80204030 to 80212442 8412 + lincRNA gene RIKEN cDNA A330069K06 gene