Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:79542788-79702795

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fnip2 3 79455974 to 79567796 111822 - protein coding gene folliculin interacting protein 2
Tssr29584 3 79542837 to 79542855 18 + TSS region transcription start site region 29584
Tssr33718 3 79549537 to 79549544 7 - TSS region transcription start site region 33718
Tssr33719 3 79550355 to 79550394 39 - TSS region transcription start site region 33719
Tssr33720 3 79551064 to 79551088 24 - TSS region transcription start site region 33720
Gm3513 3 79551314 to 79552193 879 - sense intronic lncRNA gene predicted gene 3513
Tssr33721 3 79552158 to 79552207 49 - TSS region transcription start site region 33721
Tssr33722 3 79564912 to 79564917 5 - TSS region transcription start site region 33722
Cpgi13275 3 79566933 to 79568262 1329 CpG island CpG island 13275
Tssr33723 3 79567358 to 79567375 17 - TSS region transcription start site region 33723
Tssr33724 3 79567685 to 79567694 9 - TSS region transcription start site region 33724
Tssr33725 3 79567747 to 79567764 17 - TSS region transcription start site region 33725
Tssr33726 3 79567771 to 79567790 19 - TSS region transcription start site region 33726
Tssr33727 3 79567805 to 79567863 58 - TSS region transcription start site region 33727
Tssr33728 3 79568102 to 79568154 52 - TSS region transcription start site region 33728
4930589L23Rik 3 79568192 to 79572580 4388 + lincRNA gene RIKEN cDNA 4930589L23 gene
Tssr29585 3 79568302 to 79568312 10 + TSS region transcription start site region 29585
Tssr33729 3 79572403 to 79572451 48 - TSS region transcription start site region 33729
Tssr33730 3 79572458 to 79572473 15 - TSS region transcription start site region 33730
Gm35067 3 79582588 to 79583234 646 + pseudogene predicted gene, 35067
Cpgi13276 3 79591155 to 79591861 706 CpG island CpG island 13276
Tssr33731 3 79591281 to 79591295 14 - TSS region transcription start site region 33731
Tssr33732 3 79591297 to 79591322 25 - TSS region transcription start site region 33732
Tssr29586 3 79591356 to 79591430 74 + TSS region transcription start site region 29586
Ppid 3 79591389 to 79603650 12261 + protein coding gene peptidylprolyl isomerase D (cyclophilin D)
Tssr29587 3 79591437 to 79591448 11 + TSS region transcription start site region 29587
Etfdh 3 79603788 to 79628767 24979 - protein coding gene electron transferring flavoprotein, dehydrogenase
Gm37973 3 79610538 to 79611826 1288 - unclassified gene predicted gene, 37973
Tssr33733 3 79622788 to 79622795 7 - TSS region transcription start site region 33733
Cpgi13277 3 79628490 to 79629686 1196 CpG island CpG island 13277
Tssr33734 3 79628636 to 79628647 11 - TSS region transcription start site region 33734
Tssr33735 3 79628660 to 79628745 85 - TSS region transcription start site region 33735
Tssr33736 3 79628752 to 79628763 11 - TSS region transcription start site region 33736
Tssr33737 3 79628859 to 79628870 11 - TSS region transcription start site region 33737
Tssr33738 3 79628884 to 79628885 1 - TSS region transcription start site region 33738
Tssr29588 3 79629074 to 79629115 41 + TSS region transcription start site region 29588
4930579G24Rik 3 79629079 to 79632820 3741 + protein coding gene RIKEN cDNA 4930579G24 gene
Tssr29589 3 79629117 to 79629134 17 + TSS region transcription start site region 29589
Tssr29590 3 79629139 to 79629176 37 + TSS region transcription start site region 29590
Rxfp1 3 79641611 to 79737880 96269 - protein coding gene relaxin/insulin-like family peptide receptor 1
Gm26984 3 79673367 to 79676876 3509 - sense intronic lncRNA gene predicted gene, 26984
D3Mit26.2 3 79680094 to 79680257 163 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 26.2
D3Mit26 3 79680241 to 79680390 149 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 26