Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:79169758-79369763

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rapgef2 3 79062516 to 79286517 224001 - protein coding gene Rap guanine nucleotide exchange factor (GEF) 2
Tssr33669 3 79169806 to 79169817 11 - TSS region transcription start site region 33669
Tssr33670 3 79169876 to 79169889 13 - TSS region transcription start site region 33670
Tssr33671 3 79170472 to 79170512 40 - TSS region transcription start site region 33671
Tssr33672 3 79173050 to 79173057 7 - TSS region transcription start site region 33672
Tssr33673 3 79173134 to 79173151 17 - TSS region transcription start site region 33673
Tssr33674 3 79173171 to 79173183 12 - TSS region transcription start site region 33674
Tssr33675 3 79173188 to 79173246 58 - TSS region transcription start site region 33675
Tssr33676 3 79173256 to 79173259 3 - TSS region transcription start site region 33676
Tssr33677 3 79173266 to 79173277 11 - TSS region transcription start site region 33677
Tssr33678 3 79173289 to 79173309 20 - TSS region transcription start site region 33678
Tssr33679 3 79173348 to 79173360 12 - TSS region transcription start site region 33679
Tssr33680 3 79181325 to 79181351 26 - TSS region transcription start site region 33680
Tssr33681 3 79181356 to 79181372 16 - TSS region transcription start site region 33681
Gm24150 3 79196374 to 79196477 103 + snRNA gene predicted gene, 24150
4921511C10Rik 3 79212919 to 79253913 40994 + antisense lncRNA gene RIKEN cDNA 4921511C10 gene
B930012P20Rik 3 79232281 to 79234124 1843 unclassified gene RIKEN cDNA B930012P20 gene
Tssr29575 3 79237911 to 79237922 11 + TSS region transcription start site region 29575
Tssr33682 3 79269758 to 79269763 5 - TSS region transcription start site region 33682
Cpgi13274 3 79286146 to 79287860 1714 CpG island CpG island 13274
Tssr33683 3 79286696 to 79286726 30 - TSS region transcription start site region 33683
Tssr33684 3 79287001 to 79287015 14 - TSS region transcription start site region 33684
Tssr33685 3 79287170 to 79287236 66 - TSS region transcription start site region 33685
6430573P05Rik 3 79287173 to 79289848 2675 + lincRNA gene RIKEN cDNA 6430573P05 gene
Tssr33686 3 79287244 to 79287255 11 - TSS region transcription start site region 33686
Tssr33687 3 79287269 to 79287294 25 - TSS region transcription start site region 33687
Tssr33688 3 79287307 to 79287318 11 - TSS region transcription start site region 33688
Tssr33689 3 79287327 to 79287343 16 - TSS region transcription start site region 33689
D3Ertd207e 3 79314425 to 79314650 225 DNA segment DNA segment, Chr 3, ERATO Doi 207, expressed
Gm40072 3 79334205 to 79336576 2371 - lncRNA gene predicted gene, 40072
Tssr29576 3 79336622 to 79336646 24 + TSS region transcription start site region 29576
Tssr29577 3 79336650 to 79336686 36 + TSS region transcription start site region 29577
Tssr29578 3 79336688 to 79336695 7 + TSS region transcription start site region 29578
Gm17359 3 79345329 to 79464129 118800 + protein coding gene predicted gene, 17359
Tssr29579 3 79345336 to 79345349 13 + TSS region transcription start site region 29579
Tssr29580 3 79345361 to 79345380 19 + TSS region transcription start site region 29580