Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:7620303-8259887

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cplaq8 3 7521114 to 7891638 370524 QTL circadian period of locomotor activity 8
Gm16685 3 7612705 to 7690001 77296 + antisense lncRNA gene predicted gene, 16685
Tssr28311 3 7624621 to 7624642 21 + TSS region transcription start site region 28311
Tssr28312 3 7626904 to 7626942 38 + TSS region transcription start site region 28312
Tssr28313 3 7629203 to 7629241 38 + TSS region transcription start site region 28313
Tssr28314 3 7635800 to 7635804 4 + TSS region transcription start site region 28314
Tssr28315 3 7644568 to 7644607 39 + TSS region transcription start site region 28315
Tssr28316 3 7646796 to 7646815 19 + TSS region transcription start site region 28316
Tssr28317 3 7646911 to 7646921 10 + TSS region transcription start site region 28317
Tssr28318 3 7646941 to 7646953 12 + TSS region transcription start site region 28318
Tssr28319 3 7647073 to 7647091 18 + TSS region transcription start site region 28319
Tssr28320 3 7647101 to 7647111 10 + TSS region transcription start site region 28320
Tssr28321 3 7647155 to 7647170 15 + TSS region transcription start site region 28321
Tssr28322 3 7660277 to 7660306 29 + TSS region transcription start site region 28322
Tssr28323 3 7686916 to 7686951 35 + TSS region transcription start site region 28323
D3Mit221 3 7891493 to 7891638 145 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 221
Gm29747 3 7893335 to 7893919 584 + pseudogene predicted gene, 29747
1700010I02Rik 3 7925303 to 7954887 29584 - lincRNA gene RIKEN cDNA 1700010I02 gene
D3Mit235 3 7951701 to 7951838 137 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 235
Tssr32547 3 7954859 to 7954874 15 - TSS region transcription start site region 32547
Tssr32548 3 7954894 to 7954910 16 - TSS region transcription start site region 32548
5330432E05Rik 3 8019669 to 8022831 3162 - unclassified gene RIKEN cDNA 5330432E05 gene
Tssr32549 3 8022828 to 8022857 29 - TSS region transcription start site region 32549
Gm7103 3 8214332 to 8216183 1851 + pseudogene predicted gene 7103
repro26 3 32001034 to 7891493 -24109541 heritable phenotypic marker reproductive mutant 26, JAX Reproductive Mutagenesis Program
hlb258 3 45962044 to 7891493 -38070551 heritable phenotypic marker heart, lung and blood 258