Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:75196183-76636949

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40071 3 75165057 to 75208082 43025 + lncRNA gene predicted gene, 40071
Serpini2 3 75242370 to 75270078 27708 - protein coding gene serine (or cysteine) peptidase inhibitor, clade I, member 2
Tssr33582 3 75268331 to 75268342 11 - TSS region transcription start site region 33582
Tssr33583 3 75269967 to 75270007 40 - TSS region transcription start site region 33583
Tssr33584 3 75270073 to 75270085 12 - TSS region transcription start site region 33584
Tssr909 3 75270108 to 75270119 11 - TSS region transcription start site region 909
Wdr49 3 75273928 to 75431237 157309 - protein coding gene WD repeat domain 49
Gm17836 3 75391319 to 75392620 1301 + pseudogene predicted gene, 17836
Tssr33585 3 75482132 to 75482166 34 - TSS region transcription start site region 33585
Pdcd10 3 75516490 to 75556852 40362 - protein coding gene programmed cell death 10
Cpgi13269 3 75556324 to 75557758 1434 CpG island CpG island 13269
Tssr33586 3 75556789 to 75556871 82 - TSS region transcription start site region 33586
Tssr33587 3 75556903 to 75556919 16 - TSS region transcription start site region 33587
Tssr33588 3 75556924 to 75556939 15 - TSS region transcription start site region 33588
Tssr29563 3 75557510 to 75557521 11 + TSS region transcription start site region 29563
Tssr29564 3 75557530 to 75557561 31 + TSS region transcription start site region 29564
Serpini1 3 75557533 to 75642523 84990 + protein coding gene serine (or cysteine) peptidase inhibitor, clade I, member 1
Tssr29565 3 75557576 to 75557587 11 + TSS region transcription start site region 29565
Tssr29566 3 75557594 to 75557605 11 + TSS region transcription start site region 29566
Tssr29567 3 75562914 to 75562918 4 + TSS region transcription start site region 29567
Gm37672 3 75619347 to 75623360 4013 + unclassified gene predicted gene, 37672
Platr10 3 75647446 to 75655731 8285 - lincRNA gene pluripotency associated transcript 10
Tssr33589 3 75647937 to 75647941 4 - TSS region transcription start site region 33589
Tssr33590 3 75650455 to 75650465 10 - TSS region transcription start site region 33590
Tssr33591 3 75655730 to 75655746 16 - TSS region transcription start site region 33591
Tssr33592 3 75655774 to 75655802 28 - TSS region transcription start site region 33592
Gm37193 3 75698952 to 75699464 512 - unclassified gene predicted gene, 37193
Gm25846 3 75714790 to 75714924 134 + snoRNA gene predicted gene, 25846
Gm29133 3 75748197 to 75787653 39456 + protein coding gene predicted gene 29133
Golim4 3 75876183 to 75956949 80766 - protein coding gene golgi integral membrane protein 4
Tssr33593 3 75881378 to 75881382 4 - TSS region transcription start site region 33593
Tssr910 3 75890625 to 75890642 17 - TSS region transcription start site region 910
Tssr33594 3 75891962 to 75891978 16 - TSS region transcription start site region 33594
D3Wsu79e 3 75918441 to 75918690 249 DNA segment DNA segment, Chr 3, Wayne State University 79, expressed
Gm37685 3 75952124 to 75954300 2176 + unclassified gene predicted gene, 37685
Cpgi13270 3 75955930 to 75957359 1429 CpG island CpG island 13270
Gm37256 3 75956101 to 76001136 45035 + lincRNA gene predicted gene, 37256
Tssr33595 3 75956204 to 75956240 36 - TSS region transcription start site region 33595
Tssr33596 3 75956249 to 75956260 11 - TSS region transcription start site region 33596
Tssr33597 3 75956387 to 75956456 69 - TSS region transcription start site region 33597
Tssr33598 3 75956595 to 75956609 14 - TSS region transcription start site region 33598
Tssr33599 3 75956615 to 75956642 27 - TSS region transcription start site region 33599
Tssr33600 3 75956787 to 75956869 82 - TSS region transcription start site region 33600
Tssr33601 3 75956888 to 75956959 71 - TSS region transcription start site region 33601
V125Dq4 3 76000000 to 76000000 0 QTL vitamin D active form serum level QTL 4
Gm18428 3 76040933 to 76041723 790 - pseudogene predicted gene, 18428
Cpgi13271 3 76074157 to 76074773 616 CpG island CpG island 13271
Fstl5 3 76074275 to 76710010 635735 + protein coding gene follistatin-like 5
Tssr29568 3 76074539 to 76074597 58 + TSS region transcription start site region 29568
Tssr29569 3 76074605 to 76074614 9 + TSS region transcription start site region 29569
Gm37897 3 76546691 to 76550251 3560 + unclassified gene predicted gene, 37897