Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:7421114-7621248

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pkia 3 7366669 to 7445366 78697 + protein coding gene protein kinase inhibitor, alpha
D3Mit327 3 7422168 to 7422315 147 DNA segment DNA Segment, Chr 3 Massachusetts Institute of Technology 327
Tssr28298 3 7429048 to 7429062 14 + TSS region transcription start site region 28298
Tssr28299 3 7442762 to 7442776 14 + TSS region transcription start site region 28299
Gm8826 3 7454521 to 7455521 1000 + pseudogene predicted gene 8826
Tssr28300 3 7501522 to 7501535 13 + TSS region transcription start site region 28300
Gm23592 3 7501904 to 7502020 116 - snoRNA gene predicted gene, 23592
Cpgi12954 3 7503035 to 7504159 1124 CpG island CpG island 12954
Tssr28301 3 7503423 to 7503503 80 + TSS region transcription start site region 28301
Zc2hc1a 3 7503483 to 7553836 50353 + protein coding gene zinc finger, C2HC-type containing 1A
D3Mit164 3 7521114 to 7521248 134 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 164
Cplaq8 3 7521114 to 7891638 370524 QTL circadian period of locomotor activity 8
Il7 3 7572028 to 7613760 41732 - protein coding gene interleukin 7
Tssr28302 3 7576346 to 7576362 16 + TSS region transcription start site region 28302
Tssr32539 3 7606505 to 7606519 14 - TSS region transcription start site region 32539
Tssr32540 3 7606533 to 7606550 17 - TSS region transcription start site region 32540
Cpgi12955 3 7612701 to 7613442 741 CpG island CpG island 12955
Tssr28303 3 7612702 to 7612705 3 + TSS region transcription start site region 28303
Gm16685 3 7612705 to 7690001 77296 + antisense lncRNA gene predicted gene, 16685
Tssr32541 3 7613577 to 7613592 15 - TSS region transcription start site region 32541
Tssr32542 3 7613642 to 7613656 14 - TSS region transcription start site region 32542
Tssr32543 3 7613694 to 7613704 10 - TSS region transcription start site region 32543
Tssr32544 3 7613725 to 7613732 7 - TSS region transcription start site region 32544
Tssr32545 3 7613738 to 7613765 27 - TSS region transcription start site region 32545
Tssr32546 3 7613771 to 7613785 14 - TSS region transcription start site region 32546
Tssr28304 3 7613871 to 7613889 18 + TSS region transcription start site region 28304
Tssr28305 3 7615993 to 7616003 10 + TSS region transcription start site region 28305
Tssr28306 3 7617343 to 7617375 32 + TSS region transcription start site region 28306
Tssr28307 3 7618731 to 7618744 13 + TSS region transcription start site region 28307
Tssr28308 3 7618767 to 7618782 15 + TSS region transcription start site region 28308
Tssr28309 3 7618879 to 7618892 13 + TSS region transcription start site region 28309
Tssr28310 3 7620143 to 7620146 3 + TSS region transcription start site region 28310
Hivan1 3 68809613 to 7521114 -61288499 QTL HIV-associated nephropathy 1
Aec1 3 102782718 to 7521114 -95261604 QTL autoimmune exocrinopathy 1